10 items (Labrus bergylta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109988571	Growth arrest specific 7. (474 aa)
	gas2l3	Growth arrest-specific 2 like 3. (713 aa)
	LOC109981206	Smoothelin a. (250 aa)
	pdlim4	PDZ and LIM domain 4. (404 aa)
	pof1b	POF1B actin binding protein. (452 aa)
	ENSLBEP00000017843	Calponin-homology (CH) domain-containing protein. (441 aa)
	ENSLBEP00000008098	Uncharacterized protein. (254 aa)
	ENSLBEP00000008054	WH2 domain-containing protein. (123 aa)
	LOC109992891	Growth arrest-specific 7a. (344 aa)
	lgsn	Lengsin, lens protein with glutamine synthetase domain; Belongs to the glutamine synthetase family. (685 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000008054	ENSLBEP00000008098	ENSLBEP00000008054	ENSLBEP00000008098	WH2 domain-containing protein.	Uncharacterized protein.	0.854
ENSLBEP00000008054	LOC109988571	ENSLBEP00000008054	ENSLBEP00000037485	WH2 domain-containing protein.	Growth arrest specific 7.	0.535
ENSLBEP00000008054	LOC109992891	ENSLBEP00000008054	ENSLBEP00000006773	WH2 domain-containing protein.	Growth arrest-specific 7a.	0.535
ENSLBEP00000008098	ENSLBEP00000008054	ENSLBEP00000008098	ENSLBEP00000008054	Uncharacterized protein.	WH2 domain-containing protein.	0.854
ENSLBEP00000008098	LOC109988571	ENSLBEP00000008098	ENSLBEP00000037485	Uncharacterized protein.	Growth arrest specific 7.	0.535
ENSLBEP00000008098	LOC109992891	ENSLBEP00000008098	ENSLBEP00000006773	Uncharacterized protein.	Growth arrest-specific 7a.	0.535
LOC109988571	ENSLBEP00000008054	ENSLBEP00000037485	ENSLBEP00000008054	Growth arrest specific 7.	WH2 domain-containing protein.	0.535
LOC109988571	ENSLBEP00000008098	ENSLBEP00000037485	ENSLBEP00000008098	Growth arrest specific 7.	Uncharacterized protein.	0.535
LOC109988571	pdlim4	ENSLBEP00000037485	ENSLBEP00000021378	Growth arrest specific 7.	PDZ and LIM domain 4.	0.637
LOC109992891	ENSLBEP00000008054	ENSLBEP00000006773	ENSLBEP00000008054	Growth arrest-specific 7a.	WH2 domain-containing protein.	0.535
LOC109992891	ENSLBEP00000008098	ENSLBEP00000006773	ENSLBEP00000008098	Growth arrest-specific 7a.	Uncharacterized protein.	0.535
LOC109992891	pdlim4	ENSLBEP00000006773	ENSLBEP00000021378	Growth arrest-specific 7a.	PDZ and LIM domain 4.	0.637
pdlim4	LOC109988571	ENSLBEP00000021378	ENSLBEP00000037485	PDZ and LIM domain 4.	Growth arrest specific 7.	0.637
pdlim4	LOC109992891	ENSLBEP00000021378	ENSLBEP00000006773	PDZ and LIM domain 4.	Growth arrest-specific 7a.	0.637