34 items (Labrus bergylta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109977906	Spectrin beta chain; Belongs to the spectrin family. (2079 aa)
	LOC109991691	WASP like actin nucleation promoting factor b. (501 aa)
	LOC110005537	EFhand_Ca_insen domain-containing protein. (97 aa)
	ENSLBEP00000004810	CRIB domain-containing protein. (344 aa)
	LOC109984860	WASP like actin nucleation promoting factor a. (547 aa)
	myadm	Si:dkeyp-66d1.7. (293 aa)
	LOC110001013	Zgc:77748. (268 aa)
	LOC109998040	PH domain-containing protein. (1298 aa)
	ACTN4	Actinin alpha 4. (920 aa)
	lancl1	LanC antibiotic synthetase component C-like 1 (bacterial). (406 aa)
	LOC109978056	Pleckstrin homology domain containing, family H (with MyTH4 domain) member 1. (1379 aa)
	ENSLBEP00000010885	Uncharacterized protein. (533 aa)
	LANCL3	LanC like 3. (407 aa)
	ENSLBEP00000013667	EF-hand domain-containing protein. (97 aa)
	LOC109989513	Pleckstrin homology domain containing, family H (with MyTH4 domain) member 2. (1400 aa)
	ENSLBEP00000013844	Uncharacterized protein. (660 aa)
	LOC109996971	Parvalbumin 6; Belongs to the parvalbumin family. (238 aa)
	lancl2	LanC lantibiotic synthetase component C-like 2 (bacterial). (432 aa)
	cobl	Uncharacterized protein. (1596 aa)
	LOC110004558	Rhotekin 2a. (630 aa)
	was	WASP actin nucleation promoting factor a. (464 aa)
	LOC109986764	Uncharacterized protein. (282 aa)
	ENSLBEP00000019426	Uncharacterized protein. (273 aa)
	LOC109999485	Uncharacterized protein. (284 aa)
	ENSLBEP00000021793	Rhotekin 2b. (306 aa)
	LOC109990809	Actinin, alpha 2b. (896 aa)
	ENSLBEP00000025412	Uncharacterized protein. (98 aa)
	rtkn	Rhotekin. (651 aa)
	LOC109996200	PH domain-containing protein. (637 aa)
	gys1	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan. (702 aa)
	gys2	Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan. (743 aa)
	LOC109985865	Parvalbumin 8; Belongs to the parvalbumin family. (128 aa)
	anln	Anillin, actin binding protein. (1162 aa)
	actn3	Actinin alpha 3b. (899 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000013844	ENSLBEP00000021793	ENSLBEP00000013844	ENSLBEP00000021793	Uncharacterized protein.	Rhotekin 2b.	0.448
ENSLBEP00000013844	LOC109996200	ENSLBEP00000013844	ENSLBEP00000030095	Uncharacterized protein.	PH domain-containing protein.	0.448
ENSLBEP00000013844	LOC110004558	ENSLBEP00000013844	ENSLBEP00000015177	Uncharacterized protein.	Rhotekin 2a.	0.448
ENSLBEP00000013844	rtkn	ENSLBEP00000013844	ENSLBEP00000029965	Uncharacterized protein.	Rhotekin.	0.448
ENSLBEP00000021793	ENSLBEP00000013844	ENSLBEP00000021793	ENSLBEP00000013844	Rhotekin 2b.	Uncharacterized protein.	0.448
ENSLBEP00000021793	LOC109998040	ENSLBEP00000021793	ENSLBEP00000008913	Rhotekin 2b.	PH domain-containing protein.	0.504
ENSLBEP00000021793	anln	ENSLBEP00000021793	ENSLBEP00000037223	Rhotekin 2b.	Anillin, actin binding protein.	0.504
LOC109996200	ENSLBEP00000013844	ENSLBEP00000030095	ENSLBEP00000013844	PH domain-containing protein.	Uncharacterized protein.	0.448
LOC109996200	LOC109998040	ENSLBEP00000030095	ENSLBEP00000008913	PH domain-containing protein.	PH domain-containing protein.	0.530
LOC109996200	anln	ENSLBEP00000030095	ENSLBEP00000037223	PH domain-containing protein.	Anillin, actin binding protein.	0.530
LOC109998040	ENSLBEP00000021793	ENSLBEP00000008913	ENSLBEP00000021793	PH domain-containing protein.	Rhotekin 2b.	0.504
LOC109998040	LOC109996200	ENSLBEP00000008913	ENSLBEP00000030095	PH domain-containing protein.	PH domain-containing protein.	0.530
LOC109998040	LOC110004558	ENSLBEP00000008913	ENSLBEP00000015177	PH domain-containing protein.	Rhotekin 2a.	0.530
LOC109998040	rtkn	ENSLBEP00000008913	ENSLBEP00000029965	PH domain-containing protein.	Rhotekin.	0.530
LOC110004558	ENSLBEP00000013844	ENSLBEP00000015177	ENSLBEP00000013844	Rhotekin 2a.	Uncharacterized protein.	0.448
LOC110004558	LOC109998040	ENSLBEP00000015177	ENSLBEP00000008913	Rhotekin 2a.	PH domain-containing protein.	0.530
LOC110004558	anln	ENSLBEP00000015177	ENSLBEP00000037223	Rhotekin 2a.	Anillin, actin binding protein.	0.530
anln	ENSLBEP00000021793	ENSLBEP00000037223	ENSLBEP00000021793	Anillin, actin binding protein.	Rhotekin 2b.	0.504
anln	LOC109996200	ENSLBEP00000037223	ENSLBEP00000030095	Anillin, actin binding protein.	PH domain-containing protein.	0.530
anln	LOC110004558	ENSLBEP00000037223	ENSLBEP00000015177	Anillin, actin binding protein.	Rhotekin 2a.	0.530