(29 nodes) GABA-A receptor complex network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109989526	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (460 aa)
	LOC109991036	Gamma-aminobutyric acid type A receptor beta4 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (512 aa)
	LOC109991035	Gamma-aminobutyric acid (GABA) A receptor, alpha 3; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (480 aa)
	GABRB3	Gamma-aminobutyric acid type A receptor beta3 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (506 aa)
	LOC109984112	Gamma-aminobutyric acid type A receptor alpha5 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (459 aa)
	GABRG3	Gamma-aminobutyric acid type A receptor gamma3 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (477 aa)
	LOC109993506	Gamma-aminobutyric acid type A receptor beta2 subunit a; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (404 aa)
	gabrr3	Gamma-aminobutyric acid (GABA) A receptor, rho 3a; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (441 aa)
	gabrb1	Gamma-aminobutyric acid type A receptor beta1 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (478 aa)
	LOC109989471	Gamma-aminobutyric acid type A receptor alpha2 subunit a; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (451 aa)
	gabrg1	Gamma-aminobutyric acid type A receptor gamma1 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (461 aa)
	LOC109989493	Gamma-aminobutyric acid (GABA) A receptor, rho 2a; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (472 aa)
	LOC109977695	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (415 aa)
	LOC109975718	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (442 aa)
	gabrd	Gamma-aminobutyric acid (GABA) A receptor, delta; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (461 aa)
	LOC109981091	Gamma-aminobutyric acid (GABA) A receptor, pi; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (450 aa)
	ENSLBEP00000019908	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (457 aa)
	GABRB2	Gamma-aminobutyric acid type A receptor beta2 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (522 aa)
	ENSLBEP00000022742	Neur_chan_memb domain-containing protein. (272 aa)
	LOC109987284	Gamma-aminobutyric acid (GABA) A receptor, alpha 1; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (465 aa)
	LOC109987285	Gamma-aminobutyric acid (GABA) A receptor, gamma 2; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (476 aa)
	LOC109994292	Gamma-aminobutyric acid (GABA) A receptor, rho 3b; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (483 aa)
	GABRG3-2	Gamma-aminobutyric acid type A receptor gamma3 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (446 aa)
	gabra5	Gamma-aminobutyric acid type A receptor alpha5 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (459 aa)
	gabrb3	Gamma-aminobutyric acid type A receptor beta3 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (443 aa)
	GABRR1	Gamma-aminobutyric acid type A receptor rho1 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (453 aa)
	LOC109997941	Gamma-aminobutyric acid (GABA) A receptor, rho 2b; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (474 aa)
	med28	Mediator complex subunit 28. (180 aa)
	ENSLBEP00000037712	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (436 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000019908	ENSLBEP00000022742	ENSLBEP00000019908	ENSLBEP00000022742	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Neur_chan_memb domain-containing protein.	0.656
ENSLBEP00000019908	ENSLBEP00000037712	ENSLBEP00000019908	ENSLBEP00000037712	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.655
ENSLBEP00000019908	GABRG3	ENSLBEP00000019908	ENSLBEP00000004469	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Gamma-aminobutyric acid type A receptor gamma3 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.647
ENSLBEP00000019908	GABRG3-2	ENSLBEP00000019908	ENSLBEP00000033143	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Gamma-aminobutyric acid type A receptor gamma3 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.636
ENSLBEP00000019908	LOC109977695	ENSLBEP00000019908	ENSLBEP00000012230	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.650
ENSLBEP00000019908	LOC109984112	ENSLBEP00000019908	ENSLBEP00000004364	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Gamma-aminobutyric acid type A receptor alpha5 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.653
ENSLBEP00000019908	LOC109987284	ENSLBEP00000019908	ENSLBEP00000022879	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Gamma-aminobutyric acid (GABA) A receptor, alpha 1; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.650
ENSLBEP00000019908	LOC109987285	ENSLBEP00000019908	ENSLBEP00000022949	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Gamma-aminobutyric acid (GABA) A receptor, gamma 2; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.644
ENSLBEP00000019908	LOC109989471	ENSLBEP00000019908	ENSLBEP00000010403	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Gamma-aminobutyric acid type A receptor alpha2 subunit a; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.650
ENSLBEP00000019908	LOC109991035	ENSLBEP00000019908	ENSLBEP00000002778	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Gamma-aminobutyric acid (GABA) A receptor, alpha 3; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.651
ENSLBEP00000019908	LOC109994292	ENSLBEP00000019908	ENSLBEP00000023660	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Gamma-aminobutyric acid (GABA) A receptor, rho 3b; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.677
ENSLBEP00000019908	gabra5	ENSLBEP00000019908	ENSLBEP00000033218	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Gamma-aminobutyric acid type A receptor alpha5 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.651
ENSLBEP00000019908	gabrd	ENSLBEP00000019908	ENSLBEP00000014790	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Gamma-aminobutyric acid (GABA) A receptor, delta; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.608
ENSLBEP00000019908	gabrg1	ENSLBEP00000019908	ENSLBEP00000010452	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Gamma-aminobutyric acid type A receptor gamma1 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.650
ENSLBEP00000019908	gabrr3	ENSLBEP00000019908	ENSLBEP00000005648	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Gamma-aminobutyric acid (GABA) A receptor, rho 3a; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.678
ENSLBEP00000022742	ENSLBEP00000019908	ENSLBEP00000022742	ENSLBEP00000019908	Neur_chan_memb domain-containing protein.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.656
ENSLBEP00000022742	ENSLBEP00000037712	ENSLBEP00000022742	ENSLBEP00000037712	Neur_chan_memb domain-containing protein.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.548
ENSLBEP00000022742	GABRB2	ENSLBEP00000022742	ENSLBEP00000022734	Neur_chan_memb domain-containing protein.	Gamma-aminobutyric acid type A receptor beta2 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.793
ENSLBEP00000022742	GABRB3	ENSLBEP00000022742	ENSLBEP00000004263	Neur_chan_memb domain-containing protein.	Gamma-aminobutyric acid type A receptor beta3 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.795
ENSLBEP00000022742	GABRG3	ENSLBEP00000022742	ENSLBEP00000004469	Neur_chan_memb domain-containing protein.	Gamma-aminobutyric acid type A receptor gamma3 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.843