(50 nodes) Zona pellucida domain network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109997244	Zona pellucida glycoprotein 3f, tandem duplicate 1. (328 aa)
	LOC109999496	Si:dkey-103g5.3. (382 aa)
	LOC109991439	Zona pellucida glycoprotein 2, like 2. (408 aa)
	ENSLBEP00000023677	Uncharacterized protein. (469 aa)
	LOC109999518	ZP domain-containing protein. (367 aa)
	ENSLBEP00000022657	Zona pellucida glycoprotein 3d tandem duplicate 2. (388 aa)
	LOC109990190	ZP domain-containing protein. (502 aa)
	LOC110006316	Uncharacterized protein. (339 aa)
	LOC110005845	ZP domain-containing protein. (383 aa)
	LOC109978319	ZP domain-containing protein. (781 aa)
	LOC109982644	ZP domain-containing protein. (391 aa)
	umodl1	Uncharacterized protein. (1322 aa)
	LOC109987869	Zona pellucida glycoprotein d. (400 aa)
	ENSLBEP00000013133	ZP domain-containing protein. (568 aa)
	ENSLBEP00000012507	ZP domain-containing protein. (648 aa)
	LOC110001077	ZP domain-containing protein. (378 aa)
	LOC109990618	ZP domain-containing protein. (383 aa)
	LOC110001073	ZP domain-containing protein. (514 aa)
	LOC110004453	ZP domain-containing protein. (869 aa)
	ENSLBEP00000006687	Si:dkeyp-110a12.4. (365 aa)
	LOC109985982	ZP domain-containing protein. (378 aa)
	ENSLBEP00000006216	Uncharacterized protein. (479 aa)
	oit3	Oncoprotein induced transcript 3. (540 aa)
	LOC109976749	ZP domain-containing protein. (1094 aa)
	LOC109997300	Zona pellucida glycoprotein 3f, tandem duplicate 2. (335 aa)
	LOC109993440	ZP domain-containing protein. (739 aa)
	LOC109981809	Tectorin beta. (300 aa)
	LOC110002121	ZP domain-containing protein. (476 aa)
	ENSLBEP00000038229	Uncharacterized protein. (483 aa)
	LOC109980759	ZP domain-containing protein. (315 aa)
	LOC109980733	ZP domain-containing protein. (769 aa)
	LOC109980742	Zona pellucida protein AX 4. (709 aa)
	LOC109980739	ZP domain-containing protein. (669 aa)
	ENSLBEP00000037419	ZP domain-containing protein. (641 aa)
	tgfbr3	Transforming growth factor, beta receptor III. (797 aa)
	LOC109995715	Uncharacterized protein. (1020 aa)
	LOC110001981	Uncharacterized protein. (469 aa)
	LOC109981305	ZP domain-containing protein. (599 aa)
	LOC110003394	ZP domain-containing protein. (1328 aa)
	LOC109998885	Si:ch211-229d2.5. (309 aa)
	LOC109999987	Zona pellucida-like domain containing 1b. (411 aa)
	ENSLBEP00000031070	ZP domain-containing protein. (353 aa)
	LOC109987900	CUB and zona pellucida-like domains 1, tandem duplicate 1. (723 aa)
	LOC109993198	Zona pellucida-like domain containing 1a. (414 aa)
	LOC110001907	Uncharacterized protein. (645 aa)
	LOC109995574	Zona pellucida glycoprotein 3b. (560 aa)
	LOC109993191	Si:ch73-261i21.5. (385 aa)
	LOC109989675	ZP domain-containing protein. (887 aa)
	LOC109989646	Zona pellucida protein AX 1. (909 aa)
	LOC109994381	Uncharacterized protein. (938 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000006687	ENSLBEP00000012507	ENSLBEP00000006687	ENSLBEP00000012507	Si:dkeyp-110a12.4.	ZP domain-containing protein.	0.529
ENSLBEP00000006687	LOC110001907	ENSLBEP00000006687	ENSLBEP00000027945	Si:dkeyp-110a12.4.	Uncharacterized protein.	0.529
ENSLBEP00000012507	ENSLBEP00000006687	ENSLBEP00000012507	ENSLBEP00000006687	ZP domain-containing protein.	Si:dkeyp-110a12.4.	0.529
ENSLBEP00000012507	LOC109989675	ENSLBEP00000012507	ENSLBEP00000027357	ZP domain-containing protein.	ZP domain-containing protein.	0.457
ENSLBEP00000012507	LOC110001907	ENSLBEP00000012507	ENSLBEP00000027945	ZP domain-containing protein.	Uncharacterized protein.	0.569
ENSLBEP00000037419	LOC109985982	ENSLBEP00000037419	ENSLBEP00000006590	ZP domain-containing protein.	ZP domain-containing protein.	0.576
ENSLBEP00000037419	LOC109990190	ENSLBEP00000037419	ENSLBEP00000019819	ZP domain-containing protein.	ZP domain-containing protein.	0.452
ENSLBEP00000037419	LOC110002121	ENSLBEP00000037419	ENSLBEP00000038234	ZP domain-containing protein.	ZP domain-containing protein.	0.576
ENSLBEP00000037419	LOC110005845	ENSLBEP00000037419	ENSLBEP00000018063	ZP domain-containing protein.	ZP domain-containing protein.	0.576
ENSLBEP00000038229	LOC109985982	ENSLBEP00000038229	ENSLBEP00000006590	Uncharacterized protein.	ZP domain-containing protein.	0.595
ENSLBEP00000038229	LOC109990190	ENSLBEP00000038229	ENSLBEP00000019819	Uncharacterized protein.	ZP domain-containing protein.	0.452
ENSLBEP00000038229	LOC110002121	ENSLBEP00000038229	ENSLBEP00000038234	Uncharacterized protein.	ZP domain-containing protein.	0.696
ENSLBEP00000038229	LOC110005845	ENSLBEP00000038229	ENSLBEP00000018063	Uncharacterized protein.	ZP domain-containing protein.	0.595
LOC109978319	LOC109985982	ENSLBEP00000018038	ENSLBEP00000006590	ZP domain-containing protein.	ZP domain-containing protein.	0.576
LOC109978319	LOC109990190	ENSLBEP00000018038	ENSLBEP00000019819	ZP domain-containing protein.	ZP domain-containing protein.	0.452
LOC109978319	LOC110002121	ENSLBEP00000018038	ENSLBEP00000038234	ZP domain-containing protein.	ZP domain-containing protein.	0.576
LOC109978319	LOC110005845	ENSLBEP00000018038	ENSLBEP00000018063	ZP domain-containing protein.	ZP domain-containing protein.	0.576
LOC109980733	LOC109985982	ENSLBEP00000037527	ENSLBEP00000006590	ZP domain-containing protein.	ZP domain-containing protein.	0.576
LOC109980733	LOC109990190	ENSLBEP00000037527	ENSLBEP00000019819	ZP domain-containing protein.	ZP domain-containing protein.	0.452
LOC109980733	LOC110002121	ENSLBEP00000037527	ENSLBEP00000038234	ZP domain-containing protein.	ZP domain-containing protein.	0.576