(21 nodes) Linker histone H1/H5 network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSLBEP00000026702	H15 domain-containing protein. (125 aa)
	LOC110005468	H15 domain-containing protein. (210 aa)
	LOC110003493	H15 domain-containing protein. (210 aa)
	ENSLBEP00000032891	H15 domain-containing protein. (184 aa)
	ENSLBEP00000032697	H15 domain-containing protein. (114 aa)
	LOC109987409	H15 domain-containing protein. (201 aa)
	ENSLBEP00000030270	H15 domain-containing protein. (115 aa)
	ENSLBEP00000029859	H15 domain-containing protein. (150 aa)
	ENSLBEP00000027622	H15 domain-containing protein. (163 aa)
	ENSLBEP00000026274	H15 domain-containing protein. (132 aa)
	ENSLBEP00000025505	H15 domain-containing protein. (181 aa)
	LOC109994852	Si:ch211-103n10.5. (187 aa)
	ENSLBEP00000021315	H15 domain-containing protein. (96 aa)
	LOC109986783	H1 histone family, member 0. (199 aa)
	ENSLBEP00000017995	H15 domain-containing protein. (174 aa)
	ENSLBEP00000008377	H15 domain-containing protein. (128 aa)
	hp1bp3	Heterochromatin protein 1, binding protein 3. (631 aa)
	LOC110002918	H15 domain-containing protein. (201 aa)
	LOC114921807	H15 domain-containing protein. (204 aa)
	LOC110000948	H15 domain-containing protein. (207 aa)
	LOC109997407	Linker histone H1M. (259 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000021315	LOC109986783	ENSLBEP00000021315	ENSLBEP00000020564	H15 domain-containing protein.	H1 histone family, member 0.	0.567
ENSLBEP00000021315	LOC109997407	ENSLBEP00000021315	ENSLBEP00000001757	H15 domain-containing protein.	Linker histone H1M.	0.510
ENSLBEP00000021315	hp1bp3	ENSLBEP00000021315	ENSLBEP00000008221	H15 domain-containing protein.	Heterochromatin protein 1, binding protein 3.	0.510
ENSLBEP00000025505	LOC109986783	ENSLBEP00000025505	ENSLBEP00000020564	H15 domain-containing protein.	H1 histone family, member 0.	0.567
ENSLBEP00000025505	LOC109997407	ENSLBEP00000025505	ENSLBEP00000001757	H15 domain-containing protein.	Linker histone H1M.	0.510
ENSLBEP00000025505	hp1bp3	ENSLBEP00000025505	ENSLBEP00000008221	H15 domain-containing protein.	Heterochromatin protein 1, binding protein 3.	0.510
ENSLBEP00000026274	LOC109986783	ENSLBEP00000026274	ENSLBEP00000020564	H15 domain-containing protein.	H1 histone family, member 0.	0.567
ENSLBEP00000026274	LOC109997407	ENSLBEP00000026274	ENSLBEP00000001757	H15 domain-containing protein.	Linker histone H1M.	0.510
ENSLBEP00000026274	hp1bp3	ENSLBEP00000026274	ENSLBEP00000008221	H15 domain-containing protein.	Heterochromatin protein 1, binding protein 3.	0.510
ENSLBEP00000026702	LOC109986783	ENSLBEP00000026702	ENSLBEP00000020564	H15 domain-containing protein.	H1 histone family, member 0.	0.567
ENSLBEP00000026702	LOC109997407	ENSLBEP00000026702	ENSLBEP00000001757	H15 domain-containing protein.	Linker histone H1M.	0.510
ENSLBEP00000026702	hp1bp3	ENSLBEP00000026702	ENSLBEP00000008221	H15 domain-containing protein.	Heterochromatin protein 1, binding protein 3.	0.510
LOC109986783	ENSLBEP00000021315	ENSLBEP00000020564	ENSLBEP00000021315	H1 histone family, member 0.	H15 domain-containing protein.	0.567
LOC109986783	ENSLBEP00000025505	ENSLBEP00000020564	ENSLBEP00000025505	H1 histone family, member 0.	H15 domain-containing protein.	0.567
LOC109986783	ENSLBEP00000026274	ENSLBEP00000020564	ENSLBEP00000026274	H1 histone family, member 0.	H15 domain-containing protein.	0.567
LOC109986783	ENSLBEP00000026702	ENSLBEP00000020564	ENSLBEP00000026702	H1 histone family, member 0.	H15 domain-containing protein.	0.567
LOC109986783	LOC109994852	ENSLBEP00000020564	ENSLBEP00000021380	H1 histone family, member 0.	Si:ch211-103n10.5.	0.567
LOC109994852	LOC109986783	ENSLBEP00000021380	ENSLBEP00000020564	Si:ch211-103n10.5.	H1 histone family, member 0.	0.567
LOC109994852	LOC109997407	ENSLBEP00000021380	ENSLBEP00000001757	Si:ch211-103n10.5.	Linker histone H1M.	0.510
LOC109994852	hp1bp3	ENSLBEP00000021380	ENSLBEP00000008221	Si:ch211-103n10.5.	Heterochromatin protein 1, binding protein 3.	0.510