26 items (Labrus bergylta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	lamb2	Laminin, beta 2 (laminin S). (1785 aa)
	LOC109985095	Laminin, beta 2-like. (1791 aa)
	LOC109978841	Laminin N-terminal domain-containing protein. (314 aa)
	ENSLBEP00000029121	Uncharacterized protein. (540 aa)
	ENSLBEP00000029176	Laminin N-terminal domain-containing protein. (83 aa)
	LOC109984480	Netrin G2. (633 aa)
	ENSLBEP00000033176	Laminin N-terminal domain-containing protein. (246 aa)
	ntng1	Netrin g1a. (546 aa)
	NTN1	Netrin 1. (428 aa)
	LOC109980758	Netrin 5. (643 aa)
	lama1	Laminin, alpha 1. (2848 aa)
	ENSLBEP00000024743	Uncharacterized protein. (525 aa)
	LOC109983928	Uncharacterized protein. (658 aa)
	ENSLBEP00000020252	Laminin N-terminal domain-containing protein. (159 aa)
	LOC109989134	Netrin g2a. (579 aa)
	LOC109975356	Vav 3 guanine nucleotide exchange factor b. (456 aa)
	LOC109986753	Netrin 2. (634 aa)
	LAMA2	Laminin subunit alpha 2. (3039 aa)
	LOC110001690	Uncharacterized protein. (1436 aa)
	LAMB1	Laminin, beta 1a. (1791 aa)
	LOC110004195	Uncharacterized protein. (638 aa)
	ntn4	Netrin 4. (626 aa)
	LOC110002852	Netrin 1b. (600 aa)
	LOC109996378	Uncharacterized protein. (557 aa)
	ENSLBEP00000005998	Uncharacterized protein. (1385 aa)
	lamb3	Uncharacterized protein. (1157 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000005998	ENSLBEP00000020252	ENSLBEP00000005998	ENSLBEP00000020252	Uncharacterized protein.	Laminin N-terminal domain-containing protein.	0.876
ENSLBEP00000005998	ENSLBEP00000029121	ENSLBEP00000005998	ENSLBEP00000029121	Uncharacterized protein.	Uncharacterized protein.	0.849
ENSLBEP00000005998	ENSLBEP00000029176	ENSLBEP00000005998	ENSLBEP00000029176	Uncharacterized protein.	Laminin N-terminal domain-containing protein.	0.414
ENSLBEP00000005998	ENSLBEP00000033176	ENSLBEP00000005998	ENSLBEP00000033176	Uncharacterized protein.	Laminin N-terminal domain-containing protein.	0.876
ENSLBEP00000005998	LAMB1	ENSLBEP00000005998	ENSLBEP00000015618	Uncharacterized protein.	Laminin, beta 1a.	0.849
ENSLBEP00000005998	LOC109983928	ENSLBEP00000005998	ENSLBEP00000020613	Uncharacterized protein.	Uncharacterized protein.	0.414
ENSLBEP00000005998	LOC109985095	ENSLBEP00000005998	ENSLBEP00000026840	Uncharacterized protein.	Laminin, beta 2-like.	0.849
ENSLBEP00000005998	LOC110004195	ENSLBEP00000005998	ENSLBEP00000014479	Uncharacterized protein.	Uncharacterized protein.	0.414
ENSLBEP00000005998	lama1	ENSLBEP00000005998	ENSLBEP00000003930	Uncharacterized protein.	Laminin, alpha 1.	0.774
ENSLBEP00000005998	lamb2	ENSLBEP00000005998	ENSLBEP00000026645	Uncharacterized protein.	Laminin, beta 2 (laminin S).	0.849
ENSLBEP00000005998	lamb3	ENSLBEP00000005998	ENSLBEP00000026141	Uncharacterized protein.	Uncharacterized protein.	0.921
ENSLBEP00000005998	ntn4	ENSLBEP00000005998	ENSLBEP00000011387	Uncharacterized protein.	Netrin 4.	0.414
ENSLBEP00000020252	ENSLBEP00000005998	ENSLBEP00000020252	ENSLBEP00000005998	Laminin N-terminal domain-containing protein.	Uncharacterized protein.	0.876
ENSLBEP00000020252	ENSLBEP00000024743	ENSLBEP00000020252	ENSLBEP00000024743	Laminin N-terminal domain-containing protein.	Uncharacterized protein.	0.886
ENSLBEP00000020252	ENSLBEP00000029121	ENSLBEP00000020252	ENSLBEP00000029121	Laminin N-terminal domain-containing protein.	Uncharacterized protein.	0.942
ENSLBEP00000020252	ENSLBEP00000029176	ENSLBEP00000020252	ENSLBEP00000029176	Laminin N-terminal domain-containing protein.	Laminin N-terminal domain-containing protein.	0.414
ENSLBEP00000020252	LAMA2	ENSLBEP00000020252	ENSLBEP00000017057	Laminin N-terminal domain-containing protein.	Laminin subunit alpha 2.	0.886
ENSLBEP00000020252	LAMB1	ENSLBEP00000020252	ENSLBEP00000015618	Laminin N-terminal domain-containing protein.	Laminin, beta 1a.	0.942
ENSLBEP00000020252	LOC109983928	ENSLBEP00000020252	ENSLBEP00000020613	Laminin N-terminal domain-containing protein.	Uncharacterized protein.	0.414
ENSLBEP00000020252	LOC109985095	ENSLBEP00000020252	ENSLBEP00000026840	Laminin N-terminal domain-containing protein.	Laminin, beta 2-like.	0.942