(26 nodes) G protein alpha subunit, helical insertion network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109987747	Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4. (369 aa)
	LOC110001033	Guanine nucleotide binding protein (G protein), alpha 14a. (354 aa)
	LOC110001032	Uncharacterized protein. (359 aa)
	gnas	Uncharacterized protein. (387 aa)
	LOC109991819	Guanine nucleotide binding protein (G protein), alpha 13b. (378 aa)
	LOC109999353	Guanine nucleotide binding protein (G protein) alpha v1. (360 aa)
	LOC109990103	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2a. (394 aa)
	gna12	G protein subunit alpha 12. (385 aa)
	LOC109988868	Uncharacterized protein. (354 aa)
	LOC109986230	GNAS complex locus. (379 aa)
	gnal	G protein subunit alpha L. (502 aa)
	LOC109999449	Guanine nucleotide binding protein (G protein), alpha 11a (Gq class). (402 aa)
	LOC109997137	Uncharacterized protein. (359 aa)
	LOC109997138	Guanine nucleotide binding protein (G protein), alpha 14. (354 aa)
	LOC109982845	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3. (354 aa)
	LOC109982888	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2. (350 aa)
	LOC110001890	Uncharacterized protein. (346 aa)
	LOC109980613	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b. (344 aa)
	gnat1	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1. (359 aa)
	LOC109996180	Guanine nucleotide binding protein (G protein), alpha 11b (Gq class). (359 aa)
	GNAZ	G protein subunit alpha z. (355 aa)
	LOC109994969	Uncharacterized protein. (376 aa)
	LOC109975407	Guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b. (354 aa)
	LOC110001958	Uncharacterized protein. (378 aa)
	LOC109995657	Uncharacterized protein. (354 aa)
	LOC109981841	Uncharacterized protein. (349 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GNAZ	LOC109975407	ENSLBEP00000030725	ENSLBEP00000032311	G protein subunit alpha z.	Guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b.	0.486
GNAZ	LOC109980613	ENSLBEP00000030725	ENSLBEP00000027722	G protein subunit alpha z.	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b.	0.500
GNAZ	LOC109981841	ENSLBEP00000030725	ENSLBEP00000036782	G protein subunit alpha z.	Uncharacterized protein.	0.550
GNAZ	LOC109982845	ENSLBEP00000030725	ENSLBEP00000026309	G protein subunit alpha z.	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.	0.483
GNAZ	LOC109982888	ENSLBEP00000030725	ENSLBEP00000026344	G protein subunit alpha z.	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.	0.439
GNAZ	LOC109986230	ENSLBEP00000030725	ENSLBEP00000016261	G protein subunit alpha z.	GNAS complex locus.	0.665
GNAZ	LOC109987747	ENSLBEP00000030725	ENSLBEP00000007265	G protein subunit alpha z.	Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4.	0.475
GNAZ	LOC109988868	ENSLBEP00000030725	ENSLBEP00000006672	G protein subunit alpha z.	Uncharacterized protein.	0.486
GNAZ	LOC109990103	ENSLBEP00000030725	ENSLBEP00000013862	G protein subunit alpha z.	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2a.	0.501
GNAZ	LOC109991819	ENSLBEP00000030725	ENSLBEP00000009258	G protein subunit alpha z.	Guanine nucleotide binding protein (G protein), alpha 13b.	0.549
GNAZ	LOC109994969	ENSLBEP00000030725	ENSLBEP00000031281	G protein subunit alpha z.	Uncharacterized protein.	0.503
GNAZ	LOC109995657	ENSLBEP00000030725	ENSLBEP00000034719	G protein subunit alpha z.	Uncharacterized protein.	0.483
GNAZ	LOC109996180	ENSLBEP00000030725	ENSLBEP00000029431	G protein subunit alpha z.	Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).	0.532
GNAZ	LOC109997137	ENSLBEP00000030725	ENSLBEP00000026070	G protein subunit alpha z.	Uncharacterized protein.	0.470
GNAZ	LOC109997138	ENSLBEP00000030725	ENSLBEP00000026093	G protein subunit alpha z.	Guanine nucleotide binding protein (G protein), alpha 14.	0.478
GNAZ	LOC109999353	ENSLBEP00000030725	ENSLBEP00000012729	G protein subunit alpha z.	Guanine nucleotide binding protein (G protein) alpha v1.	0.497
GNAZ	LOC109999449	ENSLBEP00000030725	ENSLBEP00000019185	G protein subunit alpha z.	Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).	0.532
GNAZ	LOC110001032	ENSLBEP00000030725	ENSLBEP00000008718	G protein subunit alpha z.	Uncharacterized protein.	0.532
GNAZ	LOC110001033	ENSLBEP00000030725	ENSLBEP00000008658	G protein subunit alpha z.	Guanine nucleotide binding protein (G protein), alpha 14a.	0.534
GNAZ	LOC110001890	ENSLBEP00000030725	ENSLBEP00000027444	G protein subunit alpha z.	Uncharacterized protein.	0.483