(30 nodes) Recoverin family network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109981219	Uncharacterized protein. (256 aa)
	rcvrn	Recoverin a. (234 aa)
	guca1b	Guanylate cyclase activator 1B. (197 aa)
	ENSLBEP00000011346	Uncharacterized protein. (212 aa)
	LOC109981473	Kv channel interacting protein 1 b. (225 aa)
	LOC109989020	Hippocalcin. (193 aa)
	KCNIP1	Potassium voltage-gated channel interacting protein 1. (225 aa)
	guca1a	Si:ch211-103a14.5. (190 aa)
	ENSLBEP00000017726	EF-hand domain-containing protein. (121 aa)
	LOC109993675	Recoverin 2. (193 aa)
	KCNIP3	Potassium voltage-gated channel interacting protein 3. (256 aa)
	LOC109984790	Guanylate cyclase activator 1C. (187 aa)
	ENSLBEP00000001746	EF-hand calcium binding domain 1. (149 aa)
	LOC109983615	Uncharacterized protein. (185 aa)
	LOC109991751	Hippocalcin like 4. (191 aa)
	LOC109984532	Neurocalcin delta b. (192 aa)
	LOC109996749	Uncharacterized protein. (191 aa)
	LOC109996748	Guanylate cyclase activator 1g. (187 aa)
	LOC109987427	Neurocalcin delta a. (179 aa)
	ncs1	Neuronal calcium sensor 1a. (190 aa)
	vsnl1	Visinin-like 1a. (191 aa)
	LOC109989652	Hippocalcin-like 1. (193 aa)
	LOC109998852	Guanylate cyclase activator 1A. (189 aa)
	LOC109994339	Uncharacterized protein. (210 aa)
	LOC109994344	Uncharacterized protein. (194 aa)
	KCNIP4	Potassium voltage-gated channel interacting protein 4. (242 aa)
	LOC110002554	Recoverin 3. (192 aa)
	LOC110004711	Si:ch211-245j22.3. (198 aa)
	KCNIP2	Potassium voltage-gated channel interacting protein 2. (253 aa)
	LOC109978034	Visinin-like 1b. (191 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC109983615	LOC109984790	ENSLBEP00000002318	ENSLBEP00000001530	Uncharacterized protein.	Guanylate cyclase activator 1C.	0.826
LOC109983615	LOC109994344	ENSLBEP00000002318	ENSLBEP00000025640	Uncharacterized protein.	Uncharacterized protein.	0.830
LOC109983615	LOC109998852	ENSLBEP00000002318	ENSLBEP00000025891	Uncharacterized protein.	Guanylate cyclase activator 1A.	0.834
LOC109983615	guca1a	ENSLBEP00000002318	ENSLBEP00000016695	Uncharacterized protein.	Si:ch211-103a14.5.	0.835
LOC109983615	guca1b	ENSLBEP00000002318	ENSLBEP00000010844	Uncharacterized protein.	Guanylate cyclase activator 1B.	0.842
LOC109984790	LOC109983615	ENSLBEP00000001530	ENSLBEP00000002318	Guanylate cyclase activator 1C.	Uncharacterized protein.	0.826
LOC109984790	LOC109998852	ENSLBEP00000001530	ENSLBEP00000025891	Guanylate cyclase activator 1C.	Guanylate cyclase activator 1A.	0.725
LOC109984790	guca1a	ENSLBEP00000001530	ENSLBEP00000016695	Guanylate cyclase activator 1C.	Si:ch211-103a14.5.	0.725
LOC109984790	guca1b	ENSLBEP00000001530	ENSLBEP00000010844	Guanylate cyclase activator 1C.	Guanylate cyclase activator 1B.	0.836
LOC109993675	rcvrn	ENSLBEP00000020818	ENSLBEP00000006697	Recoverin 2.	Recoverin a.	0.853
LOC109994344	LOC109983615	ENSLBEP00000025640	ENSLBEP00000002318	Uncharacterized protein.	Uncharacterized protein.	0.830
LOC109994344	guca1b	ENSLBEP00000025640	ENSLBEP00000010844	Uncharacterized protein.	Guanylate cyclase activator 1B.	0.853
LOC109996748	LOC109998852	ENSLBEP00000033753	ENSLBEP00000025891	Guanylate cyclase activator 1g.	Guanylate cyclase activator 1A.	0.646
LOC109996748	guca1a	ENSLBEP00000033753	ENSLBEP00000016695	Guanylate cyclase activator 1g.	Si:ch211-103a14.5.	0.646
LOC109996748	guca1b	ENSLBEP00000033753	ENSLBEP00000010844	Guanylate cyclase activator 1g.	Guanylate cyclase activator 1B.	0.727
LOC109996749	LOC109998852	ENSLBEP00000033774	ENSLBEP00000025891	Uncharacterized protein.	Guanylate cyclase activator 1A.	0.726
LOC109996749	guca1a	ENSLBEP00000033774	ENSLBEP00000016695	Uncharacterized protein.	Si:ch211-103a14.5.	0.729
LOC109996749	guca1b	ENSLBEP00000033774	ENSLBEP00000010844	Uncharacterized protein.	Guanylate cyclase activator 1B.	0.830
LOC109998852	LOC109983615	ENSLBEP00000025891	ENSLBEP00000002318	Guanylate cyclase activator 1A.	Uncharacterized protein.	0.834
LOC109998852	LOC109984790	ENSLBEP00000025891	ENSLBEP00000001530	Guanylate cyclase activator 1A.	Guanylate cyclase activator 1C.	0.725