5 items (Labrus bergylta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSLBEP00000006820	Acyl-CoA thioesterase 7. (215 aa)
	ACOT7	Acyl-CoA thioesterase 7. (188 aa)
	LOC109997342	Uncharacterized protein. (621 aa)
	acot11	Acyl-CoA thioesterase 11b. (635 aa)
	acot9	Acyl-CoA thioesterase 9, tandem duplicate 2. (474 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACOT7	ENSLBEP00000006820	ENSLBEP00000025092	ENSLBEP00000006820	Acyl-CoA thioesterase 7.	Acyl-CoA thioesterase 7.	0.945
ACOT7	LOC109997342	ENSLBEP00000025092	ENSLBEP00000036670	Acyl-CoA thioesterase 7.	Uncharacterized protein.	0.676
ACOT7	acot11	ENSLBEP00000025092	ENSLBEP00000023385	Acyl-CoA thioesterase 7.	Acyl-CoA thioesterase 11b.	0.656
ENSLBEP00000006820	ACOT7	ENSLBEP00000006820	ENSLBEP00000025092	Acyl-CoA thioesterase 7.	Acyl-CoA thioesterase 7.	0.945
ENSLBEP00000006820	LOC109997342	ENSLBEP00000006820	ENSLBEP00000036670	Acyl-CoA thioesterase 7.	Uncharacterized protein.	0.636
ENSLBEP00000006820	acot11	ENSLBEP00000006820	ENSLBEP00000023385	Acyl-CoA thioesterase 7.	Acyl-CoA thioesterase 11b.	0.626
LOC109997342	ACOT7	ENSLBEP00000036670	ENSLBEP00000025092	Uncharacterized protein.	Acyl-CoA thioesterase 7.	0.676
LOC109997342	ENSLBEP00000006820	ENSLBEP00000036670	ENSLBEP00000006820	Uncharacterized protein.	Acyl-CoA thioesterase 7.	0.636
acot11	ACOT7	ENSLBEP00000023385	ENSLBEP00000025092	Acyl-CoA thioesterase 11b.	Acyl-CoA thioesterase 7.	0.656
acot11	ENSLBEP00000006820	ENSLBEP00000023385	ENSLBEP00000006820	Acyl-CoA thioesterase 11b.	Acyl-CoA thioesterase 7.	0.626