(27 nodes) Extended PHD (ePHD) domain network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	g2e3	G2/M-phase specific E3 ubiquitin protein ligase. (713 aa)
	ENSLBEP00000006305	PHD-type domain-containing protein. (224 aa)
	ENSLBEP00000006788	Bromodomain containing 1b. (929 aa)
	jade1	Jade family PHD finger 1. (941 aa)
	LOC109979773	Uncharacterized protein. (868 aa)
	LOC109979710	Uncharacterized protein. (1244 aa)
	LOC109992790	Lysine (K)-specific demethylase 4C. (1655 aa)
	mllt10	MLLT10 histone lysine methyltransferase DOT1L cofactor. (1085 aa)
	brd1	Bromodomain containing 1a. (957 aa)
	ENSLBEP00000037684	PHD-type domain-containing protein. (229 aa)
	phf14	Uncharacterized protein. (857 aa)
	jade2	Jade family PHD finger 2. (688 aa)
	tcf20	Transcription factor 20. (2040 aa)
	LOC109988011	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (4178 aa)
	jade3	Jade family PHD finger 3. (790 aa)
	LOC109980600	Bromodomain and PHD finger containing, 3a. (1238 aa)
	LOC109989703	Uncharacterized protein. (905 aa)
	LOC109979440	Uncharacterized protein. (1162 aa)
	ENSLBEP00000025230	Uncharacterized protein. (834 aa)
	phf6	PHD finger protein 6. (362 aa)
	mllt6	MLLT6, PHD finger containing. (1101 aa)
	LOC109985581	Bromodomain and PHD finger containing, 3b. (1124 aa)
	ENSLBEP00000016010	Uncharacterized protein. (362 aa)
	kdm4a	Lysine (K)-specific demethylase 4A, genome duplicate a. (1049 aa)
	kmt2b	Lysine (K)-specific methyltransferase 2Bb. (2822 aa)
	brpf1	Uncharacterized protein. (1118 aa)
	LOC109976044	PHD-type domain-containing protein. (229 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000006305	ENSLBEP00000016010	ENSLBEP00000006305	ENSLBEP00000016010	PHD-type domain-containing protein.	Uncharacterized protein.	0.519
ENSLBEP00000006305	ENSLBEP00000025230	ENSLBEP00000006305	ENSLBEP00000025230	PHD-type domain-containing protein.	Uncharacterized protein.	0.519
ENSLBEP00000006305	LOC109979710	ENSLBEP00000006305	ENSLBEP00000038736	PHD-type domain-containing protein.	Uncharacterized protein.	0.519
ENSLBEP00000006788	LOC109980600	ENSLBEP00000006788	ENSLBEP00000031376	Bromodomain containing 1b.	Bromodomain and PHD finger containing, 3a.	0.682
ENSLBEP00000006788	LOC109985581	ENSLBEP00000006788	ENSLBEP00000018021	Bromodomain containing 1b.	Bromodomain and PHD finger containing, 3b.	0.679
ENSLBEP00000006788	tcf20	ENSLBEP00000006788	ENSLBEP00000035445	Bromodomain containing 1b.	Transcription factor 20.	0.412
ENSLBEP00000016010	ENSLBEP00000006305	ENSLBEP00000016010	ENSLBEP00000006305	Uncharacterized protein.	PHD-type domain-containing protein.	0.519
ENSLBEP00000016010	ENSLBEP00000037684	ENSLBEP00000016010	ENSLBEP00000037684	Uncharacterized protein.	PHD-type domain-containing protein.	0.519
ENSLBEP00000016010	LOC109988011	ENSLBEP00000016010	ENSLBEP00000035088	Uncharacterized protein.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	0.716
ENSLBEP00000016010	g2e3	ENSLBEP00000016010	ENSLBEP00000026379	Uncharacterized protein.	G2/M-phase specific E3 ubiquitin protein ligase.	0.511
ENSLBEP00000016010	kmt2b	ENSLBEP00000016010	ENSLBEP00000013058	Uncharacterized protein.	Lysine (K)-specific methyltransferase 2Bb.	0.716
ENSLBEP00000016010	phf6	ENSLBEP00000016010	ENSLBEP00000021879	Uncharacterized protein.	PHD finger protein 6.	0.524
ENSLBEP00000016010	tcf20	ENSLBEP00000016010	ENSLBEP00000035445	Uncharacterized protein.	Transcription factor 20.	0.519
ENSLBEP00000025230	ENSLBEP00000006305	ENSLBEP00000025230	ENSLBEP00000006305	Uncharacterized protein.	PHD-type domain-containing protein.	0.519
ENSLBEP00000025230	ENSLBEP00000037684	ENSLBEP00000025230	ENSLBEP00000037684	Uncharacterized protein.	PHD-type domain-containing protein.	0.519
ENSLBEP00000025230	LOC109979710	ENSLBEP00000025230	ENSLBEP00000038736	Uncharacterized protein.	Uncharacterized protein.	0.414
ENSLBEP00000025230	LOC109988011	ENSLBEP00000025230	ENSLBEP00000035088	Uncharacterized protein.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	0.716
ENSLBEP00000025230	g2e3	ENSLBEP00000025230	ENSLBEP00000026379	Uncharacterized protein.	G2/M-phase specific E3 ubiquitin protein ligase.	0.511
ENSLBEP00000025230	kmt2b	ENSLBEP00000025230	ENSLBEP00000013058	Uncharacterized protein.	Lysine (K)-specific methyltransferase 2Bb.	0.716
ENSLBEP00000025230	phf6	ENSLBEP00000025230	ENSLBEP00000021879	Uncharacterized protein.	PHD finger protein 6.	0.524