(56 nodes) Synthesis of PC network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LPIN2	Lipin 2. (855 aa)
	stard7	StAR-related lipid transfer (START) domain containing 7. (408 aa)
	LPCAT1	Lysophosphatidylcholine acyltransferase 1. (603 aa)
	phospho2	Phosphatase, orphan 2. (241 aa)
	abhd3	Abhydrolase domain containing 3. (412 aa)
	LOC109993801	Zgc:123305. (1000 aa)
	LOC110002120	Choline kinase beta. (521 aa)
	LOC110000723	StAR-related lipid transfer (START) domain containing 15. (260 aa)
	ENSLBEP00000026290	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (353 aa)
	LOC110000139	Lysophosphatidylcholine acyltransferase 1. (500 aa)
	slc44a5	Solute carrier family 44 member 5b; Belongs to the CTL (choline transporter-like) family. (726 aa)
	LOC110001699	Casein kinase 2, alpha prime polypeptide a; Belongs to the protein kinase superfamily. (350 aa)
	LOC109989436	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (696 aa)
	chat	Choline O-acetyltransferase a; Belongs to the carnitine/choline acetyltransferase family. (687 aa)
	LOC109991712	Uncharacterized protein. (561 aa)
	LOC109983550	Phosphate cytidylyltransferase 1, choline, beta b. (368 aa)
	ABHD2	Abhydrolase domain containing 2b. (438 aa)
	LOC109989447	Abhydrolase domain containing 2a. (431 aa)
	LOC109992242	Lipin 1. (994 aa)
	ENSLBEP00000007145	Uncharacterized protein. (233 aa)
	slc44a4	Solute carrier family 44 member 4; Belongs to the CTL (choline transporter-like) family. (730 aa)
	ENSLBEP00000007536	Phosphatase, orphan 1. (276 aa)
	LOC109986668	Zgc:86598; Belongs to the protein kinase superfamily. (392 aa)
	stard10	StAR-related lipid transfer (START) domain containing 10. (263 aa)
	SLC44A1	Solute carrier family 44 member 1; Belongs to the CTL (choline transporter-like) family. (650 aa)
	pctp	Phosphatidylcholine transfer protein. (213 aa)
	LOC109987993	Abhydrolase domain containing 15a. (506 aa)
	LOC109986627	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (215 aa)
	LOC109996400	Zgc:63569; Belongs to the CTL (choline transporter-like) family. (706 aa)
	LOC109990642	Carboxylesterase 3. (575 aa)
	LOC110001596	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (215 aa)
	lpin1	Si:ch73-21k16.1. (870 aa)
	csnk2a2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (350 aa)
	ENSLBEP00000023694	Lipin_N domain-containing protein. (200 aa)
	LOC109992969	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family. (635 aa)
	LOC109985447	START domain containing 14. (267 aa)
	LOC109991841	Choline kinase alpha. (418 aa)
	LOC109993602	Choline phosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (384 aa)
	ABHD1	Abhydrolase domain containing 1. (440 aa)
	LOC109998450	Solute carrier family 44 member 2; Belongs to the CTL (choline transporter-like) family. (613 aa)
	cept1	Choline/ethanolamine phosphotransferase 1b; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (399 aa)
	LOC109988165	Casein kinase 2, alpha 4 polypeptide; Belongs to the protein kinase superfamily. (393 aa)
	LOC109985437	Zgc:171501. (563 aa)
	ENSLBEP00000018435	Solute carrier family 44 member 5a; Belongs to the CTL (choline transporter-like) family. (292 aa)
	LOC109977901	Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (273 aa)
	LOC109985006	Lipin 2. (954 aa)
	pemt	Phosphatidylethanolamine N-methyltransferase; Catalyzes the three sequential steps of the methylation pathway of phosphatidylcholine biosynthesis, the SAM-dependent methylation of phosphatidylethanolamine (PE) to phosphatidylmonomethylethanolamine (PMME), PMME to phosphatidyldimethylethanolamine (PDME), and PDME to phosphatidylcholine (PC); Belongs to the class VI-like SAM-binding methyltransferase superfamily. PEMT/PEM2 methyltransferase family. (269 aa)
	pcyt1b	Phosphate cytidylyltransferase 1, choline, beta a. (360 aa)
	LOC109975211	Uncharacterized protein; Belongs to the CTL (choline transporter-like) family. (649 aa)
	ENSLBEP00000017422	Uncharacterized protein. (115 aa)
	pcyt1a	Phosphate cytidylyltransferase 1, choline, alpha a. (371 aa)
	LOC109996753	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (588 aa)
	LOC109989758	Major facilitator superfamily domain containing 2B. (527 aa)
	LOC109981306	Major facilitator superfamily domain containing 2aa. (518 aa)
	mfsd2a	Major facilitator superfamily domain containing 2ab. (526 aa)
	LOC110000275	Solute carrier family 44 member 1b; Belongs to the CTL (choline transporter-like) family. (776 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABHD1	ENSLBEP00000017422	ENSLBEP00000015346	ENSLBEP00000017422	Abhydrolase domain containing 1.	Uncharacterized protein.	0.502
ABHD1	LOC110000139	ENSLBEP00000015346	ENSLBEP00000024309	Abhydrolase domain containing 1.	Lysophosphatidylcholine acyltransferase 1.	0.502
ABHD1	LPCAT1	ENSLBEP00000015346	ENSLBEP00000028952	Abhydrolase domain containing 1.	Lysophosphatidylcholine acyltransferase 1.	0.502
ABHD2	ENSLBEP00000017422	ENSLBEP00000005921	ENSLBEP00000017422	Abhydrolase domain containing 2b.	Uncharacterized protein.	0.502
ABHD2	LOC110000139	ENSLBEP00000005921	ENSLBEP00000024309	Abhydrolase domain containing 2b.	Lysophosphatidylcholine acyltransferase 1.	0.502
ABHD2	LPCAT1	ENSLBEP00000005921	ENSLBEP00000028952	Abhydrolase domain containing 2b.	Lysophosphatidylcholine acyltransferase 1.	0.502
ENSLBEP00000007145	ENSLBEP00000007536	ENSLBEP00000007145	ENSLBEP00000007536	Uncharacterized protein.	Phosphatase, orphan 1.	0.842
ENSLBEP00000007145	LOC109983550	ENSLBEP00000007145	ENSLBEP00000005330	Uncharacterized protein.	Phosphate cytidylyltransferase 1, choline, beta b.	0.855
ENSLBEP00000007145	LOC109989436	ENSLBEP00000007145	ENSLBEP00000000171	Uncharacterized protein.	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	0.463
ENSLBEP00000007145	LOC109990642	ENSLBEP00000007145	ENSLBEP00000009405	Uncharacterized protein.	Carboxylesterase 3.	0.463
ENSLBEP00000007145	LOC109991841	ENSLBEP00000007145	ENSLBEP00000012462	Uncharacterized protein.	Choline kinase alpha.	0.855
ENSLBEP00000007145	LOC109992969	ENSLBEP00000007145	ENSLBEP00000010884	Uncharacterized protein.	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.	0.833
ENSLBEP00000007145	LOC110002120	ENSLBEP00000007145	ENSLBEP00000038217	Uncharacterized protein.	Choline kinase beta.	0.855
ENSLBEP00000007145	chat	ENSLBEP00000007145	ENSLBEP00000000361	Uncharacterized protein.	Choline O-acetyltransferase a; Belongs to the carnitine/choline acetyltransferase family.	0.833
ENSLBEP00000007145	pcyt1a	ENSLBEP00000007145	ENSLBEP00000016899	Uncharacterized protein.	Phosphate cytidylyltransferase 1, choline, alpha a.	0.855
ENSLBEP00000007145	pcyt1b	ENSLBEP00000007145	ENSLBEP00000022572	Uncharacterized protein.	Phosphate cytidylyltransferase 1, choline, beta a.	0.855
ENSLBEP00000007536	ENSLBEP00000007145	ENSLBEP00000007536	ENSLBEP00000007145	Phosphatase, orphan 1.	Uncharacterized protein.	0.842
ENSLBEP00000007536	LOC109983550	ENSLBEP00000007536	ENSLBEP00000005330	Phosphatase, orphan 1.	Phosphate cytidylyltransferase 1, choline, beta b.	0.855
ENSLBEP00000007536	LOC109989436	ENSLBEP00000007536	ENSLBEP00000000171	Phosphatase, orphan 1.	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.	0.463
ENSLBEP00000007536	LOC109990642	ENSLBEP00000007536	ENSLBEP00000009405	Phosphatase, orphan 1.	Carboxylesterase 3.	0.463