45 items (Labrus bergylta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rps27a	Ribosomal protein S27a. (156 aa)
	tgfa	Transforming growth factor, alpha. (254 aa)
	LOC109984031	SH3-domain GRB2-like 1a. (368 aa)
	cblc	Cbl proto-oncogene C, E3 ubiquitin protein ligase. (608 aa)
	ENSLBEP00000004175	Sprouty RTK signaling antagonist 2. (376 aa)
	ptpn3	Protein tyrosine phosphatase non-receptor type 3. (880 aa)
	LOC109980209	Uncharacterized protein. (577 aa)
	LOC109999324	Rho guanine nucleotide exchange factor (GEF) 7b. (651 aa)
	LOC110001612	Epidermal growth factor receptor pathway substrate 15-like 1a. (861 aa)
	LOC109988924	Uncharacterized protein. (875 aa)
	sh3d21	SH3 domain containing 21. (574 aa)
	ENSLBEP00000013035	VHS domain-containing protein. (42 aa)
	LOC109994148	Cell division cycle 42. (191 aa)
	LOC110001663	SH3-domain GRB2-like 3a. (384 aa)
	CDC42	Cell division cycle 42. (203 aa)
	LOC109995395	Uncharacterized protein. (191 aa)
	ptprk	Protein tyrosine phosphatase receptor type K. (1222 aa)
	ENSLBEP00000018713	EH domain-containing protein. (66 aa)
	spry1	Sprouty homolog 1, antagonist of FGF signaling (Drosophila). (365 aa)
	PTPRM	Protein tyrosine phosphatase receptor type M. (1391 aa)
	stam	Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1. (515 aa)
	eps15	Epidermal growth factor receptor pathway substrate 15. (1128 aa)
	egf	Epidermal growth factor. (1031 aa)
	sh3gl2	SH3 domain containing GRB2 like 2a, endophilin A1. (368 aa)
	LOC109999494	Protein tyrosine phosphatase receptor type T. (1021 aa)
	ubb	Ubiquitin B. (759 aa)
	stam2	Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2. (517 aa)
	LOC110006065	Epidermal growth factor receptor pathway substrate 15 like 1. (878 aa)
	grb2	Growth factor receptor bound protein 2. (230 aa)
	LOC109996076	SH3-domain GRB2-like 1b. (351 aa)
	arhgef7	Rho guanine nucleotide exchange factor (GEF) 7a. (799 aa)
	btc	Betacellulin, epidermal growth factor family member. (182 aa)
	LOC110001875	SH3-domain kinase binding protein 1. (612 aa)
	cbl	Cbl proto-oncogene, E3 ubiquitin protein ligase. (960 aa)
	LOC109976595	Uncharacterized protein. (221 aa)
	LOC110003296	Uncharacterized protein. (138 aa)
	ENSLBEP00000030423	EGF-like domain-containing protein. (173 aa)
	epgn	Epithelial mitogen homolog (mouse). (164 aa)
	LOC110003336	Uncharacterized protein. (378 aa)
	ENSLBEP00000032512	MAM domain-containing protein. (162 aa)
	hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate. (765 aa)
	LOC110002760	Uncharacterized protein. (347 aa)
	LOC109988038	Crystallin, beta B1, like 3; Belongs to the beta/gamma-crystallin family. (223 aa)
	cd2ap	CD2-associated protein. (655 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC42	ENSLBEP00000013035	ENSLBEP00000014221	ENSLBEP00000013035	Cell division cycle 42.	VHS domain-containing protein.	0.557
CDC42	ENSLBEP00000018713	ENSLBEP00000014221	ENSLBEP00000018713	Cell division cycle 42.	EH domain-containing protein.	0.411
CDC42	ENSLBEP00000030423	ENSLBEP00000014221	ENSLBEP00000030423	Cell division cycle 42.	EGF-like domain-containing protein.	0.699
CDC42	LOC109976595	ENSLBEP00000014221	ENSLBEP00000028315	Cell division cycle 42.	Uncharacterized protein.	0.609
CDC42	LOC109980209	ENSLBEP00000014221	ENSLBEP00000009610	Cell division cycle 42.	Uncharacterized protein.	0.820
CDC42	LOC109984031	ENSLBEP00000014221	ENSLBEP00000001826	Cell division cycle 42.	SH3-domain GRB2-like 1a.	0.426
CDC42	LOC109988924	ENSLBEP00000014221	ENSLBEP00000011455	Cell division cycle 42.	Uncharacterized protein.	0.674
CDC42	LOC109995395	ENSLBEP00000014221	ENSLBEP00000015957	Cell division cycle 42.	Uncharacterized protein.	0.815
CDC42	LOC109996076	ENSLBEP00000014221	ENSLBEP00000022978	Cell division cycle 42.	SH3-domain GRB2-like 1b.	0.515
CDC42	LOC109999324	ENSLBEP00000014221	ENSLBEP00000010106	Cell division cycle 42.	Rho guanine nucleotide exchange factor (GEF) 7b.	0.820
CDC42	LOC110001612	ENSLBEP00000014221	ENSLBEP00000010362	Cell division cycle 42.	Epidermal growth factor receptor pathway substrate 15-like 1a.	0.415
CDC42	LOC110001663	ENSLBEP00000014221	ENSLBEP00000014079	Cell division cycle 42.	SH3-domain GRB2-like 3a.	0.515
CDC42	LOC110001875	ENSLBEP00000014221	ENSLBEP00000026054	Cell division cycle 42.	SH3-domain kinase binding protein 1.	0.631
CDC42	LOC110002760	ENSLBEP00000014221	ENSLBEP00000034065	Cell division cycle 42.	Uncharacterized protein.	0.515
CDC42	LOC110003296	ENSLBEP00000014221	ENSLBEP00000030398	Cell division cycle 42.	Uncharacterized protein.	0.816
CDC42	LOC110006065	ENSLBEP00000014221	ENSLBEP00000022227	Cell division cycle 42.	Epidermal growth factor receptor pathway substrate 15 like 1.	0.415
CDC42	arhgef7	ENSLBEP00000014221	ENSLBEP00000024264	Cell division cycle 42.	Rho guanine nucleotide exchange factor (GEF) 7a.	0.820
CDC42	cbl	ENSLBEP00000014221	ENSLBEP00000027006	Cell division cycle 42.	Cbl proto-oncogene, E3 ubiquitin protein ligase.	0.674
CDC42	cblc	ENSLBEP00000014221	ENSLBEP00000002361	Cell division cycle 42.	Cbl proto-oncogene C, E3 ubiquitin protein ligase.	0.674
CDC42	cd2ap	ENSLBEP00000014221	ENSLBEP00000036508	Cell division cycle 42.	CD2-associated protein.	0.631