(15 nodes) p75NTR recruits signalling complexes network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109981803	Nerve growth factor b (beta polypeptide); Belongs to the NGF-beta family. (201 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	LOC109983093	Nerve growth factor receptor a (TNFR superfamily, member 16). (326 aa)
	ripk2	Receptor-interacting serine-threonine kinase 2. (569 aa)
	LOC109984909	Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family. (295 aa)
	prkci	Protein kinase C. (594 aa)
	ubb	Ubiquitin B. (759 aa)
	LOC109975995	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (548 aa)
	myd88	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. (287 aa)
	LOC110002624	Protein kinase domain-containing protein. (828 aa)
	LOC109988061	Nerve growth factor receptor b. (432 aa)
	sqstm1	Sequestosome 1. (272 aa)
	ENSLBEP00000032673	PB1 domain-containing protein. (108 aa)
	LOC109991608	Inhibitor of nuclear factor kappa B kinase subunit beta. (704 aa)
	LOC109990925	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (568 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000032673	LOC109975995	ENSLBEP00000032673	ENSLBEP00000023249	PB1 domain-containing protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.982
ENSLBEP00000032673	LOC109983093	ENSLBEP00000032673	ENSLBEP00000010406	PB1 domain-containing protein.	Nerve growth factor receptor a (TNFR superfamily, member 16).	0.737
ENSLBEP00000032673	LOC109990925	ENSLBEP00000032673	ENSLBEP00000034805	PB1 domain-containing protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.982
ENSLBEP00000032673	LOC109991608	ENSLBEP00000032673	ENSLBEP00000033093	PB1 domain-containing protein.	Inhibitor of nuclear factor kappa B kinase subunit beta.	0.663
ENSLBEP00000032673	LOC110002624	ENSLBEP00000032673	ENSLBEP00000028087	PB1 domain-containing protein.	Protein kinase domain-containing protein.	0.764
ENSLBEP00000032673	myd88	ENSLBEP00000032673	ENSLBEP00000026996	PB1 domain-containing protein.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.740
ENSLBEP00000032673	prkci	ENSLBEP00000032673	ENSLBEP00000017764	PB1 domain-containing protein.	Protein kinase C.	0.925
ENSLBEP00000032673	ripk2	ENSLBEP00000032673	ENSLBEP00000010906	PB1 domain-containing protein.	Receptor-interacting serine-threonine kinase 2.	0.731
ENSLBEP00000032673	rps27a	ENSLBEP00000032673	ENSLBEP00000000668	PB1 domain-containing protein.	Ribosomal protein S27a.	0.929
ENSLBEP00000032673	sqstm1	ENSLBEP00000032673	ENSLBEP00000032661	PB1 domain-containing protein.	Sequestosome 1.	0.444
ENSLBEP00000032673	ubb	ENSLBEP00000032673	ENSLBEP00000021236	PB1 domain-containing protein.	Ubiquitin B.	0.970
LOC109975995	ENSLBEP00000032673	ENSLBEP00000023249	ENSLBEP00000032673	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	PB1 domain-containing protein.	0.982
LOC109975995	LOC109983093	ENSLBEP00000023249	ENSLBEP00000010406	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Nerve growth factor receptor a (TNFR superfamily, member 16).	0.948
LOC109975995	LOC109984909	ENSLBEP00000023249	ENSLBEP00000011000	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.	0.586
LOC109975995	LOC109991608	ENSLBEP00000023249	ENSLBEP00000033093	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Inhibitor of nuclear factor kappa B kinase subunit beta.	0.814
LOC109975995	LOC110002624	ENSLBEP00000023249	ENSLBEP00000028087	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Protein kinase domain-containing protein.	0.992
LOC109975995	myd88	ENSLBEP00000023249	ENSLBEP00000026996	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.	0.988
LOC109975995	prkci	ENSLBEP00000023249	ENSLBEP00000017764	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Protein kinase C.	0.706
LOC109975995	ripk2	ENSLBEP00000023249	ENSLBEP00000010906	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Receptor-interacting serine-threonine kinase 2.	0.952
LOC109975995	rps27a	ENSLBEP00000023249	ENSLBEP00000000668	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Ribosomal protein S27a.	0.971