17 items (Labrus bergylta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SEMA4D	Semaphorin 4D; Belongs to the semaphorin family. (888 aa)
	RND1	Rho family GTPase 1. (232 aa)
	arhgef12	Rho guanine nucleotide exchange factor (GEF) 12a. (1464 aa)
	RHOB	Ras homolog family member B. (141 aa)
	rock1	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1367 aa)
	LOC109990297	Uncharacterized protein. (193 aa)
	rock2	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. (1378 aa)
	erbb2	Receptor protein-tyrosine kinase. (1305 aa)
	ENSLBEP00000034531	DH domain-containing protein. (1198 aa)
	LOC109994817	Rho family GTPase 1b. (232 aa)
	LOC109984918	Uncharacterized protein. (205 aa)
	LOC109993560	Uncharacterized protein. (202 aa)
	LOC109984913	Uncharacterized protein. (193 aa)
	LOC109998617	Si:ch211-129c21.1; Belongs to the semaphorin family. (810 aa)
	LOC109980884	Ras homolog family member Ca. (196 aa)
	LOC109984042	Semaphorin 4e; Belongs to the semaphorin family. (791 aa)
	LOC109981514	Uncharacterized protein. (193 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000034531	LOC109980884	ENSLBEP00000034531	ENSLBEP00000002979	DH domain-containing protein.	Ras homolog family member Ca.	0.858
ENSLBEP00000034531	LOC109981514	ENSLBEP00000034531	ENSLBEP00000020602	DH domain-containing protein.	Uncharacterized protein.	0.858
ENSLBEP00000034531	LOC109984042	ENSLBEP00000034531	ENSLBEP00000001761	DH domain-containing protein.	Semaphorin 4e; Belongs to the semaphorin family.	0.554
ENSLBEP00000034531	LOC109984913	ENSLBEP00000034531	ENSLBEP00000010277	DH domain-containing protein.	Uncharacterized protein.	0.935
ENSLBEP00000034531	LOC109984918	ENSLBEP00000034531	ENSLBEP00000012644	DH domain-containing protein.	Uncharacterized protein.	0.858
ENSLBEP00000034531	LOC109990297	ENSLBEP00000034531	ENSLBEP00000027144	DH domain-containing protein.	Uncharacterized protein.	0.858
ENSLBEP00000034531	LOC109993560	ENSLBEP00000034531	ENSLBEP00000010992	DH domain-containing protein.	Uncharacterized protein.	0.858
ENSLBEP00000034531	LOC109994817	ENSLBEP00000034531	ENSLBEP00000017431	DH domain-containing protein.	Rho family GTPase 1b.	0.807
ENSLBEP00000034531	LOC109998617	ENSLBEP00000034531	ENSLBEP00000007541	DH domain-containing protein.	Si:ch211-129c21.1; Belongs to the semaphorin family.	0.554
ENSLBEP00000034531	RHOB	ENSLBEP00000034531	ENSLBEP00000026886	DH domain-containing protein.	Ras homolog family member B.	0.858
ENSLBEP00000034531	RND1	ENSLBEP00000034531	ENSLBEP00000025417	DH domain-containing protein.	Rho family GTPase 1.	0.807
ENSLBEP00000034531	SEMA4D	ENSLBEP00000034531	ENSLBEP00000024073	DH domain-containing protein.	Semaphorin 4D; Belongs to the semaphorin family.	0.554
ENSLBEP00000034531	erbb2	ENSLBEP00000034531	ENSLBEP00000028929	DH domain-containing protein.	Receptor protein-tyrosine kinase.	0.515
ENSLBEP00000034531	rock1	ENSLBEP00000034531	ENSLBEP00000027068	DH domain-containing protein.	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity.	0.577
ENSLBEP00000034531	rock2	ENSLBEP00000034531	ENSLBEP00000027555	DH domain-containing protein.	Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity.	0.577
LOC109980884	ENSLBEP00000034531	ENSLBEP00000002979	ENSLBEP00000034531	Ras homolog family member Ca.	DH domain-containing protein.	0.858
LOC109980884	LOC109984042	ENSLBEP00000002979	ENSLBEP00000001761	Ras homolog family member Ca.	Semaphorin 4e; Belongs to the semaphorin family.	0.470
LOC109980884	LOC109984913	ENSLBEP00000002979	ENSLBEP00000010277	Ras homolog family member Ca.	Uncharacterized protein.	0.659
LOC109980884	LOC109994817	ENSLBEP00000002979	ENSLBEP00000017431	Ras homolog family member Ca.	Rho family GTPase 1b.	0.528
LOC109980884	LOC109998617	ENSLBEP00000002979	ENSLBEP00000007541	Ras homolog family member Ca.	Si:ch211-129c21.1; Belongs to the semaphorin family.	0.470