18 items (Labrus bergylta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109990876	Uncharacterized protein. (375 aa)
	ctnnb1	Catenin (cadherin-associated protein), beta 1. (782 aa)
	ENSLBEP00000016373	Uncharacterized protein. (1116 aa)
	LOC109993352	Uncharacterized protein. (1169 aa)
	LOC109994476	Cadherin 31; Cadherins are calcium-dependent cell adhesion proteins. (861 aa)
	LOC110003296	Uncharacterized protein. (138 aa)
	iqgap2	IQ motif containing GTPase activating protein 2. (1500 aa)
	ENSLBEP00000026786	Uncharacterized protein. (69 aa)
	men1	Multiple endocrine neoplasia I. (631 aa)
	LOC110001162	Uncharacterized protein; Belongs to the actin family. (372 aa)
	iqgap1	IQ motif containing GTPase activating protein 1. (1630 aa)
	ENSLBEP00000016431	Uncharacterized protein. (273 aa)
	ENSLBEP00000016406	Uncharacterized protein. (86 aa)
	LOC109995395	Uncharacterized protein. (191 aa)
	LOC109998153	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (756 aa)
	CDC42	Cell division cycle 42. (203 aa)
	LOC109994148	Cell division cycle 42. (191 aa)
	LOC109996963	Uncharacterized protein. (376 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC42	ENSLBEP00000016406	ENSLBEP00000014221	ENSLBEP00000016406	Cell division cycle 42.	Uncharacterized protein.	0.931
CDC42	ENSLBEP00000026786	ENSLBEP00000014221	ENSLBEP00000026786	Cell division cycle 42.	Uncharacterized protein.	0.759
CDC42	LOC109990876	ENSLBEP00000014221	ENSLBEP00000010576	Cell division cycle 42.	Uncharacterized protein.	0.624
CDC42	LOC109994476	ENSLBEP00000014221	ENSLBEP00000033358	Cell division cycle 42.	Cadherin 31; Cadherins are calcium-dependent cell adhesion proteins.	0.624
CDC42	LOC109995395	ENSLBEP00000014221	ENSLBEP00000015957	Cell division cycle 42.	Uncharacterized protein.	0.815
CDC42	LOC109996963	ENSLBEP00000014221	ENSLBEP00000012703	Cell division cycle 42.	Uncharacterized protein.	0.624
CDC42	LOC109998153	ENSLBEP00000014221	ENSLBEP00000015889	Cell division cycle 42.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.624
CDC42	LOC110001162	ENSLBEP00000014221	ENSLBEP00000022437	Cell division cycle 42.	Uncharacterized protein; Belongs to the actin family.	0.624
CDC42	LOC110003296	ENSLBEP00000014221	ENSLBEP00000030398	Cell division cycle 42.	Uncharacterized protein.	0.816
CDC42	ctnnb1	ENSLBEP00000014221	ENSLBEP00000009611	Cell division cycle 42.	Catenin (cadherin-associated protein), beta 1.	0.781
CDC42	iqgap1	ENSLBEP00000014221	ENSLBEP00000022230	Cell division cycle 42.	IQ motif containing GTPase activating protein 1.	0.960
CDC42	iqgap2	ENSLBEP00000014221	ENSLBEP00000028949	Cell division cycle 42.	IQ motif containing GTPase activating protein 2.	0.960
CDC42	men1	ENSLBEP00000014221	ENSLBEP00000025568	Cell division cycle 42.	Multiple endocrine neoplasia I.	0.629
ENSLBEP00000016373	ENSLBEP00000016406	ENSLBEP00000016373	ENSLBEP00000016406	Uncharacterized protein.	Uncharacterized protein.	0.522
ENSLBEP00000016373	ENSLBEP00000016431	ENSLBEP00000016373	ENSLBEP00000016431	Uncharacterized protein.	Uncharacterized protein.	0.899
ENSLBEP00000016373	ENSLBEP00000026786	ENSLBEP00000016373	ENSLBEP00000026786	Uncharacterized protein.	Uncharacterized protein.	0.429
ENSLBEP00000016373	LOC109990876	ENSLBEP00000016373	ENSLBEP00000010576	Uncharacterized protein.	Uncharacterized protein.	0.417
ENSLBEP00000016373	LOC109996963	ENSLBEP00000016373	ENSLBEP00000012703	Uncharacterized protein.	Uncharacterized protein.	0.417
ENSLBEP00000016373	LOC110001162	ENSLBEP00000016373	ENSLBEP00000022437	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.417
ENSLBEP00000016373	iqgap1	ENSLBEP00000016373	ENSLBEP00000022230	Uncharacterized protein.	IQ motif containing GTPase activating protein 1.	0.522