115 items (Labrus bergylta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109990291	Protein kinase domain-containing protein. (649 aa)
	LOC109991907	Proteasome subunit alpha type. (246 aa)
	psme4	Proteasome activator subunit 4a. (1755 aa)
	LOC109992400	Ets variant 4. (482 aa)
	CDC42	Cell division cycle 42. (203 aa)
	psme3	Proteasome activator subunit 3. (267 aa)
	psmb2	Proteasome subunit beta. (199 aa)
	ENSLBEP00000013884	Uncharacterized protein. (79 aa)
	LOC109991248	Zgc:154093. (281 aa)
	LOC109994148	Cell division cycle 42. (191 aa)
	pak2	Non-specific serine/threonine protein kinase. (530 aa)
	psmd7	Proteasome 26S subunit, non-ATPase 7. (330 aa)
	ccnd2	Cyclin D2, b; Belongs to the cyclin family. (294 aa)
	pak1	Non-specific serine/threonine protein kinase. (576 aa)
	LOC109976956	Proteasome 26S subunit, non-ATPase 3. (516 aa)
	LOC110006134	Proteasome 26S subunit, non-ATPase 6. (386 aa)
	PSME2	Proteasome activator subunit 2. (245 aa)
	ENSLBEP00000011328	DnaJ_C domain-containing protein. (249 aa)
	CDKN3	Cyclin-dependent kinase inhibitor 3; May play a role in cell cycle regulation. Dual specificity phosphatase active toward substrates containing either phosphotyrosine or phosphoserine residues. (178 aa)
	LOC109997533	Si:dkey-16p21.7. (884 aa)
	LOC110001607	Radial spoke head component 4A. (518 aa)
	LOC109998693	Septin 7b; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (426 aa)
	LOC109998042	Septin 15; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (433 aa)
	psma2	Proteasome subunit alpha type. (234 aa)
	psmf1	Proteasome inhibitor subunit 1. (274 aa)
	ENSLBEP00000007679	CDC42 effector protein (Rho GTPase binding) 3. (288 aa)
	hspb1	Heat shock protein, alpha-crystallin-related, 1; Belongs to the small heat shock protein (HSP20) family. (215 aa)
	LOC109976849	Forkhead box O1 a. (451 aa)
	LOC109997496	Exportin 1 (CRM1 homolog, yeast) b. (1071 aa)
	LOC109990045	Proteasome 26S subunit, non-ATPase 4b. (375 aa)
	psmc1	Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family. (440 aa)
	LOC109983646	Proteasome subunit alpha type. (246 aa)
	dusp23	Dual specificity phosphatase 23a. (151 aa)
	dnajb13	DnaJ heat shock protein family (Hsp40) member B13. (315 aa)
	psma1	Proteasome subunit alpha type. (271 aa)
	psmb1	Proteasome subunit beta. (238 aa)
	psmc3	Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family. (427 aa)
	PAK3	Non-specific serine/threonine protein kinase. (574 aa)
	LOC109988204	Exportin 1 (CRM1 homolog, yeast) a. (918 aa)
	psma5	Proteasome subunit alpha type. (241 aa)
	ENSLBEP00000002618	Uncharacterized protein. (98 aa)
	LOC109977436	AAA domain-containing protein. (350 aa)
	LOC110002263	Uncharacterized protein. (521 aa)
	rag2	Recombination activating gene 2. (533 aa)
	rag1	V(D)J recombination-activating protein 1; Catalytic component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T-cell receptor genes in developing B and T- lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. In the RAG complex, RAG1 mediates the DNA-binding to the conserved recombination signal sequences (RSS) and catalyzes the DNA cleavage activities by introducing a double-strand break [...] (1066 aa)
	ENSLBEP00000001197	Cyclin Dx; Belongs to the cyclin family. (304 aa)
	rps27a	Ribosomal protein S27a. (156 aa)
	PSMD13	Proteasome 26S subunit, non-ATPase 13. (351 aa)
	PAK2	Non-specific serine/threonine protein kinase. (510 aa)
	LOC109998476	Zgc:122979. (384 aa)
	LOC109987536	Septin 7a; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (475 aa)
	LOC109993367	Forkhead box O1 a. (678 aa)
	psme1	Proteasome activator subunit 1. (252 aa)
	psmc2	Proteasome 26S subunit, ATPase 2; Belongs to the AAA ATPase family. (433 aa)
	prkacb	Uncharacterized protein; Belongs to the protein kinase superfamily. (380 aa)
	LOC109995013	Proteasome 26S subunit, non-ATPase 4a. (372 aa)
	LOC109989338	26S proteasome non-ATPase regulatory subunit 3-like. (516 aa)
	psmd14	Proteasome 26S subunit, non-ATPase 14. (310 aa)
	psmd6	Proteasome 26S subunit, non-ATPase 6. (386 aa)
	LOC109996750	BR serine/threonine kinase 2. (824 aa)
	LOC109987713	Protein kinase domain-containing protein. (866 aa)
	psmd1	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (913 aa)
	LOC109992188	Uncharacterized protein. (1795 aa)
	LOC110002716	Proteasome subunit beta. (275 aa)
	LOC109989210	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily. (390 aa)
	LOC110002717	Proteasome subunit beta 12. (217 aa)
	psmc4	Proteasome 26S subunit, ATPase 4; Belongs to the AAA ATPase family. (404 aa)
	LOC109989240	DnaJ heat shock protein family (Hsp40) member B1a. (319 aa)
	mapk6	Mitogen-activated protein kinase 6. (756 aa)
	psmb7	Proteasome subunit beta. (286 aa)
	psmb4	Proteasome subunit beta; Belongs to the peptidase T1B family. (258 aa)
	psmd5	Proteasome 26S subunit, non-ATPase 5. (504 aa)
	LOC109982246	Proteasome subunit beta11b. (351 aa)
	LOC110003296	Uncharacterized protein. (138 aa)
	ENSLBEP00000029561	Uncharacterized protein. (289 aa)
	LOC109998372	Proteasome subunit beta. (271 aa)
	psmc6	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (389 aa)
	psma6	Proteasome subunit alpha type. (246 aa)
	ENSLBEP00000028264	annotation not available (117 aa)
	psmc5	Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family. (406 aa)
	PSMD11	PCI domain-containing protein. (473 aa)
	LOC110005673	Proteasome subunit alpha type. (261 aa)
	LOC109981590	Uncharacterized protein. (542 aa)
	ENSLBEP00000024400	Uncharacterized protein. (289 aa)
	psma3	Proteasome subunit alpha type. (255 aa)
	psmd8	Proteasome 26S subunit, non-ATPase 8. (265 aa)
	psma8	Proteasome subunit alpha type. (251 aa)
	LOC110000672	DnaJ heat shock protein family (Hsp40) member B1b. (349 aa)
	LOC110001827	Heat shock protein, alpha-crystallin-related, b15; Belongs to the small heat shock protein (HSP20) family. (204 aa)
	mapkapk5	MAPK activated protein kinase 5. (471 aa)
	psme2	Proteasome activator subunit 2. (340 aa)
	LOC109986839	Proteasome subunit alpha type. (261 aa)
	cdc42ep5	CDC42 effector protein (Rho GTPase binding) 5. (297 aa)
	psmb3	Proteasome subunit beta. (206 aa)
	mapk4	Mitogen-activated protein kinase 4. (730 aa)
	LOC109978465	Serine/threonine-protein kinase PAK 2. (530 aa)
	ubb	Ubiquitin B. (759 aa)
	ENSLBEP00000020284	J domain-containing protein. (157 aa)
	kxd1	KxDL motif containing 1. (185 aa)
	cdk1	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily. (303 aa)
	dnajb5	DnaJ heat shock protein family (Hsp40) member B5. (371 aa)
	LOC109975122	Proteasome subunit beta. (275 aa)
	foxo3	Forkhead box O3b. (667 aa)
	psmd10	Proteasome 26S subunit, non-ATPase 10. (226 aa)
	ENSLBEP00000018568	RPN6_N domain-containing protein. (95 aa)
	etv1	Ets variant 1. (515 aa)
	ccnd3	Cyclin D3; Belongs to the cyclin family. (303 aa)
	psmd9	Proteasome 26S subunit, non-ATPase 9. (212 aa)
	cdkn3	Cyclin-dependent kinase inhibitor 3. (234 aa)
	dnajb4	DnaJ heat shock protein family (Hsp40) member B4. (340 aa)
	LOC109997643	Protein kinase, cAMP-dependent, catalytic, beta b; Belongs to the protein kinase superfamily. (351 aa)
	psmd12	Proteasome 26S subunit, non-ATPase 12. (456 aa)
	LOC110001694	Proteasome 26S subunit, non-ATPase 13. (378 aa)
	LOC109995395	Uncharacterized protein. (191 aa)
	LOC109992389	Proteasome 26S subunit, non-ATPase 11b. (422 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC42	ENSLBEP00000007679	ENSLBEP00000014221	ENSLBEP00000007679	Cell division cycle 42.	CDC42 effector protein (Rho GTPase binding) 3.	0.563
CDC42	LOC109978465	ENSLBEP00000014221	ENSLBEP00000021345	Cell division cycle 42.	Serine/threonine-protein kinase PAK 2.	0.949
CDC42	LOC109989210	ENSLBEP00000014221	ENSLBEP00000032294	Cell division cycle 42.	Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.	0.486
CDC42	LOC109995395	ENSLBEP00000014221	ENSLBEP00000015957	Cell division cycle 42.	Uncharacterized protein.	0.815
CDC42	LOC109997643	ENSLBEP00000014221	ENSLBEP00000016475	Cell division cycle 42.	Protein kinase, cAMP-dependent, catalytic, beta b; Belongs to the protein kinase superfamily.	0.486
CDC42	LOC110003296	ENSLBEP00000014221	ENSLBEP00000030398	Cell division cycle 42.	Uncharacterized protein.	0.816
CDC42	PAK2	ENSLBEP00000014221	ENSLBEP00000037898	Cell division cycle 42.	Non-specific serine/threonine protein kinase.	0.953
CDC42	PAK3	ENSLBEP00000014221	ENSLBEP00000003730	Cell division cycle 42.	Non-specific serine/threonine protein kinase.	0.979
CDC42	cdc42ep5	ENSLBEP00000014221	ENSLBEP00000022168	Cell division cycle 42.	CDC42 effector protein (Rho GTPase binding) 5.	0.789
CDC42	mapk4	ENSLBEP00000014221	ENSLBEP00000021493	Cell division cycle 42.	Mitogen-activated protein kinase 4.	0.740
CDC42	mapk6	ENSLBEP00000014221	ENSLBEP00000031731	Cell division cycle 42.	Mitogen-activated protein kinase 6.	0.755
CDC42	pak1	ENSLBEP00000014221	ENSLBEP00000012945	Cell division cycle 42.	Non-specific serine/threonine protein kinase.	0.979
CDC42	pak2	ENSLBEP00000014221	ENSLBEP00000013620	Cell division cycle 42.	Non-specific serine/threonine protein kinase.	0.949
CDC42	prkacb	ENSLBEP00000014221	ENSLBEP00000035648	Cell division cycle 42.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.486
CDC42	rps27a	ENSLBEP00000014221	ENSLBEP00000000668	Cell division cycle 42.	Ribosomal protein S27a.	0.747
CDC42	ubb	ENSLBEP00000014221	ENSLBEP00000021236	Cell division cycle 42.	Ubiquitin B.	0.761
CDKN3	cdk1	ENSLBEP00000011140	ENSLBEP00000019816	Cyclin-dependent kinase inhibitor 3; May play a role in cell cycle regulation. Dual specificity phosphatase active toward substrates containing either phosphotyrosine or phosphoserine residues.	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.	0.745
CDKN3	mapk4	ENSLBEP00000011140	ENSLBEP00000021493	Cyclin-dependent kinase inhibitor 3; May play a role in cell cycle regulation. Dual specificity phosphatase active toward substrates containing either phosphotyrosine or phosphoserine residues.	Mitogen-activated protein kinase 4.	0.591
CDKN3	mapk6	ENSLBEP00000011140	ENSLBEP00000031731	Cyclin-dependent kinase inhibitor 3; May play a role in cell cycle regulation. Dual specificity phosphatase active toward substrates containing either phosphotyrosine or phosphoserine residues.	Mitogen-activated protein kinase 6.	0.591
CDKN3	psmd12	ENSLBEP00000011140	ENSLBEP00000016341	Cyclin-dependent kinase inhibitor 3; May play a role in cell cycle regulation. Dual specificity phosphatase active toward substrates containing either phosphotyrosine or phosphoserine residues.	Proteasome 26S subunit, non-ATPase 12.	0.427