STRINGSTRING
rps27a rps27a ENSLBEP00000002780 ENSLBEP00000002780 LOC109984106 LOC109984106 LOC109989501 LOC109989501 tab1 tab1 kxd1 kxd1 map3k20 map3k20 ubb ubb LOC109975995 LOC109975995 LOC110002624 LOC110002624 LOC109990925 LOC109990925 map3k7 map3k7 sarm1 sarm1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rps27aRibosomal protein S27a. (156 aa)
ENSLBEP00000002780Uncharacterized protein. (87 aa)
LOC109984106Protein kinase domain-containing protein. (670 aa)
LOC109989501Protein kinase domain-containing protein. (505 aa)
tab1TGF-beta activated kinase 1/MAP3K7 binding protein 1. (547 aa)
kxd1KxDL motif containing 1. (185 aa)
map3k20Uncharacterized protein. (803 aa)
ubbUbiquitin B. (759 aa)
LOC109975995TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (548 aa)
LOC110002624Protein kinase domain-containing protein. (828 aa)
LOC109990925TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (568 aa)
map3k7Mitogen-activated protein kinase kinase kinase 7. (602 aa)
sarm1Sterile alpha and TIR motif containing 1. (713 aa)
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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