STRINGSTRING
LOC109990933 LOC109990933 LOC109989015 LOC109989015 myd88 myd88 TRPC6-2 TRPC6-2 trpv4 trpv4 LOC110001784 LOC110001784 TRPM4 TRPM4 trpm7 trpm7 TRPC6 TRPC6 nox4 nox4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC109990933Transient receptor potential cation channel, subfamily M, member 5. (1095 aa)
LOC109989015Interferon regulatory factor 3. (465 aa)
myd88Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. (287 aa)
TRPC6-2ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family. (883 aa)
trpv4Transient receptor potential cation channel, subfamily V, member 4. (535 aa)
LOC110001784Transient receptor potential cation channel, subfamily M, member 3. (1647 aa)
TRPM4Transient receptor potential cation channel subfamily M member 4. (1106 aa)
trpm7Transient receptor potential cation channel, subfamily M, member 7. (1909 aa)
TRPC6Transient receptor potential cation channel, subfamily C, member 6b; Belongs to the transient receptor (TC 1.A.4) family. (842 aa)
nox4FAD-binding FR-type domain-containing protein. (562 aa)
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.