(15 nodes) Meprin and TRAF homology network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109982381	Metalloendopeptidase. (557 aa)
	traf3	TNF receptor-associated factor 3. (666 aa)
	LOC109975995	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (548 aa)
	LOC109996590	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (519 aa)
	trim37	Tripartite motif containing 37. (768 aa)
	LOC109996317	Metalloendopeptidase. (580 aa)
	LOC109981780	Metalloendopeptidase. (647 aa)
	LOC109995112	TNF receptor-associated factor. (492 aa)
	LOC109990925	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (568 aa)
	traf4	TNF receptor-associated factor. (470 aa)
	LOC110002709	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (586 aa)
	spopl	Speckle type BTB/POZ protein like b. (392 aa)
	LOC109998929	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (598 aa)
	usp7	Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family. (1115 aa)
	SPOP	Speckle type BTB/POZ protein. (374 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC109975995	LOC109995112	ENSLBEP00000023249	ENSLBEP00000001259	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	TNF receptor-associated factor.	0.922
LOC109975995	LOC109996590	ENSLBEP00000023249	ENSLBEP00000023058	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.951
LOC109975995	LOC109998929	ENSLBEP00000023249	ENSLBEP00000030749	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.922
LOC109975995	LOC110002709	ENSLBEP00000023249	ENSLBEP00000031541	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.972
LOC109975995	traf3	ENSLBEP00000023249	ENSLBEP00000024692	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	TNF receptor-associated factor 3.	0.972
LOC109975995	traf4	ENSLBEP00000023249	ENSLBEP00000034790	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	TNF receptor-associated factor.	0.515
LOC109975995	trim37	ENSLBEP00000023249	ENSLBEP00000010019	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Tripartite motif containing 37.	0.619
LOC109975995	usp7	ENSLBEP00000023249	ENSLBEP00000029320	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family.	0.816
LOC109981780	LOC109982381	ENSLBEP00000001804	ENSLBEP00000028212	Metalloendopeptidase.	Metalloendopeptidase.	0.844
LOC109982381	LOC109981780	ENSLBEP00000028212	ENSLBEP00000001804	Metalloendopeptidase.	Metalloendopeptidase.	0.844
LOC109990925	LOC109995112	ENSLBEP00000034805	ENSLBEP00000001259	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	TNF receptor-associated factor.	0.922
LOC109990925	LOC109996590	ENSLBEP00000034805	ENSLBEP00000023058	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.951
LOC109990925	LOC109998929	ENSLBEP00000034805	ENSLBEP00000030749	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.922
LOC109990925	LOC110002709	ENSLBEP00000034805	ENSLBEP00000031541	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.972
LOC109990925	traf3	ENSLBEP00000034805	ENSLBEP00000024692	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	TNF receptor-associated factor 3.	0.972
LOC109990925	traf4	ENSLBEP00000034805	ENSLBEP00000034790	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	TNF receptor-associated factor.	0.515
LOC109990925	trim37	ENSLBEP00000034805	ENSLBEP00000010019	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Tripartite motif containing 37.	0.619
LOC109990925	usp7	ENSLBEP00000034805	ENSLBEP00000029320	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family.	0.816
LOC109995112	LOC109975995	ENSLBEP00000001259	ENSLBEP00000023249	TNF receptor-associated factor.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.922
LOC109995112	LOC109990925	ENSLBEP00000001259	ENSLBEP00000034805	TNF receptor-associated factor.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.922