44 items (Labrus bergylta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	armh1	Armadillo like helical domain containing 1. (409 aa)
	PKP3	Plakophilin 3a. (795 aa)
	LOC109981212	ARVCF delta catenin family member a. (898 aa)
	LOC109992786	Importin subunit alpha; Belongs to the importin alpha family. (563 aa)
	LOC110002507	Si:dkey-191g9.5. (560 aa)
	kpna3	Importin subunit alpha; Belongs to the importin alpha family. (520 aa)
	armc8	Armadillo repeat containing 8. (589 aa)
	kpna4	Importin subunit alpha; Belongs to the importin alpha family. (520 aa)
	LOC110002655	APC regulator of WNT signaling pathway 2. (2397 aa)
	LOC110001276	Importin subunit alpha; Belongs to the importin alpha family. (523 aa)
	heatr3	HEAT repeat containing 3. (677 aa)
	LOC109993903	Catenin (cadherin-associated protein), delta 2b. (1171 aa)
	KIFAP3	Kinesin associated protein 3. (775 aa)
	rttn	Rotatin. (2160 aa)
	RAP1GDS1	Rap1 GTPase-GDP dissociation stimulator 1. (547 aa)
	LOC110005835	Importin subunit alpha; Belongs to the importin alpha family. (519 aa)
	LOC110006261	Importin subunit alpha-6. (536 aa)
	LOC109998151	Telomere repeat binding bouquet formation protein 1. (839 aa)
	KPNA2	Importin subunit alpha; Belongs to the importin alpha family. (523 aa)
	CTNND1	Catenin delta 1. (910 aa)
	LOC109988988	Importin subunit alpha; Belongs to the importin alpha family. (542 aa)
	LOC109977707	Uncharacterized protein. (767 aa)
	LOC109976174	Importin subunit alpha; Belongs to the importin alpha family. (443 aa)
	ENSLBEP00000011729	Plakophilin 1a. (365 aa)
	LOC109990637	Junction plakoglobin a. (705 aa)
	LOC110000509	Importin subunit alpha; Belongs to the importin alpha family. (536 aa)
	ctnnb1	Catenin (cadherin-associated protein), beta 1. (782 aa)
	PKP4	Plakophilin 4. (1207 aa)
	LOC109978527	Uncharacterized protein. (552 aa)
	armc4	Armadillo repeat containing 4. (1022 aa)
	LOC109984183	Uncharacterized protein. (1121 aa)
	armc5	Armadillo repeat containing 5. (1267 aa)
	LOC109995768	Uncharacterized protein. (748 aa)
	LOC109982422	Uncharacterized protein. (768 aa)
	LOC109981744	Plakophilin 1b. (802 aa)
	ARMC6	Armadillo repeat containing 6. (465 aa)
	LOC109989794	Catenin (cadherin-associated protein), delta 2a. (1266 aa)
	LOC109989818	Catenin (cadherin-associated protein), delta 1. (956 aa)
	LOC109999103	ARVCF delta catenin family member b. (990 aa)
	LOC109992631	Transmembrane and coiled-coil domains 6. (461 aa)
	spag6	Sperm associated antigen 6. (507 aa)
	armc3	Armadillo repeat containing 3. (819 aa)
	pkp2	Plakophilin 2. (779 aa)
	LOC109989628	Uncharacterized protein. (768 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARMC6	armc3	ENSLBEP00000033390	ENSLBEP00000038351	Armadillo repeat containing 6.	Armadillo repeat containing 3.	0.428
CTNND1	LOC109982422	ENSLBEP00000013769	ENSLBEP00000000830	Catenin delta 1.	Uncharacterized protein.	0.813
CTNND1	LOC109989818	ENSLBEP00000013769	ENSLBEP00000035084	Catenin delta 1.	Catenin (cadherin-associated protein), delta 1.	0.841
CTNND1	LOC109990637	ENSLBEP00000013769	ENSLBEP00000011430	Catenin delta 1.	Junction plakoglobin a.	0.831
CTNND1	LOC109995768	ENSLBEP00000013769	ENSLBEP00000004708	Catenin delta 1.	Uncharacterized protein.	0.831
CTNND1	ctnnb1	ENSLBEP00000013769	ENSLBEP00000009611	Catenin delta 1.	Catenin (cadherin-associated protein), beta 1.	0.927
ENSLBEP00000011729	LOC109982422	ENSLBEP00000011729	ENSLBEP00000000830	Plakophilin 1a.	Uncharacterized protein.	0.628
ENSLBEP00000011729	LOC109990637	ENSLBEP00000011729	ENSLBEP00000011430	Plakophilin 1a.	Junction plakoglobin a.	0.735
ENSLBEP00000011729	LOC109995768	ENSLBEP00000011729	ENSLBEP00000004708	Plakophilin 1a.	Uncharacterized protein.	0.735
ENSLBEP00000011729	ctnnb1	ENSLBEP00000011729	ENSLBEP00000009611	Plakophilin 1a.	Catenin (cadherin-associated protein), beta 1.	0.630
KIFAP3	LOC110002655	ENSLBEP00000031883	ENSLBEP00000029948	Kinesin associated protein 3.	APC regulator of WNT signaling pathway 2.	0.416
KPNA2	LOC109976174	ENSLBEP00000015419	ENSLBEP00000012455	Importin subunit alpha; Belongs to the importin alpha family.	Importin subunit alpha; Belongs to the importin alpha family.	0.663
KPNA2	LOC109988988	ENSLBEP00000015419	ENSLBEP00000012937	Importin subunit alpha; Belongs to the importin alpha family.	Importin subunit alpha; Belongs to the importin alpha family.	0.664
KPNA2	LOC109992786	ENSLBEP00000015419	ENSLBEP00000024590	Importin subunit alpha; Belongs to the importin alpha family.	Importin subunit alpha; Belongs to the importin alpha family.	0.664
KPNA2	LOC110000509	ENSLBEP00000015419	ENSLBEP00000010809	Importin subunit alpha; Belongs to the importin alpha family.	Importin subunit alpha; Belongs to the importin alpha family.	0.663
KPNA2	LOC110006261	ENSLBEP00000015419	ENSLBEP00000016713	Importin subunit alpha; Belongs to the importin alpha family.	Importin subunit alpha-6.	0.663
LOC109976174	KPNA2	ENSLBEP00000012455	ENSLBEP00000015419	Importin subunit alpha; Belongs to the importin alpha family.	Importin subunit alpha; Belongs to the importin alpha family.	0.663
LOC109976174	LOC110001276	ENSLBEP00000012455	ENSLBEP00000030611	Importin subunit alpha; Belongs to the importin alpha family.	Importin subunit alpha; Belongs to the importin alpha family.	0.661
LOC109976174	LOC110005835	ENSLBEP00000012455	ENSLBEP00000017449	Importin subunit alpha; Belongs to the importin alpha family.	Importin subunit alpha; Belongs to the importin alpha family.	0.664
LOC109976174	kpna3	ENSLBEP00000012455	ENSLBEP00000025159	Importin subunit alpha; Belongs to the importin alpha family.	Importin subunit alpha; Belongs to the importin alpha family.	0.758