34 items (Labrus bergylta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC110002051	Disco interacting protein 2 homolog C. (1430 aa)
	ttll12	Tubulin tyrosine ligase-like family, member 12. (637 aa)
	LOC109995676	Uncharacterized protein. (864 aa)
	bcat1	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (356 aa)
	upb1	Ureidopropionase, beta. (378 aa)
	LOC109985281	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (478 aa)
	pank4	Pantothenate kinase. (780 aa)
	dpys	Dihydropyrimidinase. (443 aa)
	LOC109996841	Disco-interacting protein 2 homolog A. (1319 aa)
	LOC109983517	Uncharacterized protein. (148 aa)
	coasy	CoA synthase. (535 aa)
	dcakd	Dephospho-CoA kinase domain containing. (229 aa)
	LOC109998005	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (390 aa)
	hsd17b14	Hydroxysteroid (17-beta) dehydrogenase 14; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (228 aa)
	LOC109987831	Pantothenate kinase 1a. (460 aa)
	pdcd5	Programmed cell death 5. (144 aa)
	aldh16a1	Aldehyde dehydrogenase 16 family, member A1. (825 aa)
	LOC109995335	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (489 aa)
	LOC109995340	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (526 aa)
	LOC109979849	Ectonucleotide pyrophosphatase/phosphodiesterase 1. (802 aa)
	LOC110004960	GAS domain-containing protein. (424 aa)
	LOC109991326	Uncharacterized protein. (155 aa)
	LOC109994790	Disco-interacting protein 2 homolog Ba. (1591 aa)
	LOC109994833	Cytochrome c oxidase assembly factor COX19. (95 aa)
	ppcdc	Phosphopantothenoylcysteine decarboxylase. (220 aa)
	aldh2	Aldehyde dehydrogenase 2 family member, tandem duplicate 2; Belongs to the aldehyde dehydrogenase family. (519 aa)
	LOC109994269	Disco-interacting protein 2 homolog Cb. (1486 aa)
	LOC109992490	Disco-interacting protein 2 homolog Bb. (1280 aa)
	aasdhppt	Aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase. (297 aa)
	dpyd	Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family. (1023 aa)
	LOC110003137	GAS domain-containing protein. (455 aa)
	ppcs	Phosphopantothenoylcysteine synthetase. (353 aa)
	LOC109984482	Zgc:63972. (152 aa)
	LOC110002033	Pantothenate kinase 2. (436 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC109979849	LOC109994833	ENSLBEP00000012867	ENSLBEP00000020721	Ectonucleotide pyrophosphatase/phosphodiesterase 1.	Cytochrome c oxidase assembly factor COX19.	0.511
LOC109979849	LOC109995676	ENSLBEP00000012867	ENSLBEP00000034936	Ectonucleotide pyrophosphatase/phosphodiesterase 1.	Uncharacterized protein.	0.846
LOC109979849	coasy	ENSLBEP00000012867	ENSLBEP00000005313	Ectonucleotide pyrophosphatase/phosphodiesterase 1.	CoA synthase.	0.840
LOC109979849	dcakd	ENSLBEP00000012867	ENSLBEP00000005475	Ectonucleotide pyrophosphatase/phosphodiesterase 1.	Dephospho-CoA kinase domain containing.	0.840
LOC109979849	pank4	ENSLBEP00000012867	ENSLBEP00000002412	Ectonucleotide pyrophosphatase/phosphodiesterase 1.	Pantothenate kinase.	0.845
LOC109979849	ppcdc	ENSLBEP00000012867	ENSLBEP00000020999	Ectonucleotide pyrophosphatase/phosphodiesterase 1.	Phosphopantothenoylcysteine decarboxylase.	0.840
LOC109979849	ppcs	ENSLBEP00000012867	ENSLBEP00000031950	Ectonucleotide pyrophosphatase/phosphodiesterase 1.	Phosphopantothenoylcysteine synthetase.	0.479
LOC109983517	LOC109994833	ENSLBEP00000002737	ENSLBEP00000020721	Uncharacterized protein.	Cytochrome c oxidase assembly factor COX19.	0.724
LOC109983517	coasy	ENSLBEP00000002737	ENSLBEP00000005313	Uncharacterized protein.	CoA synthase.	0.933
LOC109983517	dcakd	ENSLBEP00000002737	ENSLBEP00000005475	Uncharacterized protein.	Dephospho-CoA kinase domain containing.	0.724
LOC109983517	pank4	ENSLBEP00000002737	ENSLBEP00000002412	Uncharacterized protein.	Pantothenate kinase.	0.761
LOC109983517	ppcdc	ENSLBEP00000002737	ENSLBEP00000020999	Uncharacterized protein.	Phosphopantothenoylcysteine decarboxylase.	0.724
LOC109983517	ppcs	ENSLBEP00000002737	ENSLBEP00000031950	Uncharacterized protein.	Phosphopantothenoylcysteine synthetase.	0.800
LOC109984482	dpys	ENSLBEP00000033337	ENSLBEP00000002526	Zgc:63972.	Dihydropyrimidinase.	0.406
LOC109985281	LOC109992490	ENSLBEP00000000827	ENSLBEP00000025131	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	Disco-interacting protein 2 homolog Bb.	0.615
LOC109985281	LOC109994269	ENSLBEP00000000827	ENSLBEP00000023440	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	Disco-interacting protein 2 homolog Cb.	0.615
LOC109985281	LOC109994790	ENSLBEP00000000827	ENSLBEP00000018554	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	Disco-interacting protein 2 homolog Ba.	0.615
LOC109985281	LOC109995340	ENSLBEP00000000827	ENSLBEP00000010799	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.828
LOC109985281	LOC109996841	ENSLBEP00000000827	ENSLBEP00000002661	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	Disco-interacting protein 2 homolog A.	0.615
LOC109985281	LOC109998005	ENSLBEP00000000827	ENSLBEP00000006212	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.	0.637