STRINGSTRING
ATG2B ATG2B LOC110001531 LOC110001531 ppp2ca ppp2ca LOC110003619 LOC110003619 atg4b atg4b ppp2cb ppp2cb gabarap gabarap atg7 atg7 mlst8 mlst8 igbp1 igbp1 LOC109982314 LOC109982314 atg4d atg4d atg9a atg9a atg3 atg3 atg10 atg10 ulk3 ulk3 LOC110000670 LOC110000670 atg12 atg12 pik3r4 pik3r4 ttc14 ttc14 LOC109993731 LOC109993731 atg4c atg4c mtor mtor rptor rptor atg101 atg101 atg5 atg5 ENSLBEP00000015535 ENSLBEP00000015535 wipi2 wipi2 WIPI1 WIPI1 ulk2 ulk2 atg13 atg13 LOC109991839 LOC109991839 atg2a atg2a becn1 becn1 LOC109993517 LOC109993517 LOC109978894 LOC109978894 ENSLBEP00000005111 ENSLBEP00000005111 ENSLBEP00000002067 ENSLBEP00000002067 ENSLBEP00000001542 ENSLBEP00000001542 pik3c3 pik3c3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ATG2BAutophagy related 2B. (883 aa)
LOC110001531Uncharacterized protein. (117 aa)
ppp2caSerine/threonine-protein phosphatase. (309 aa)
LOC110003619GABA(A) receptor-associated protein like 2. (125 aa)
atg4bCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (407 aa)
ppp2cbSerine/threonine-protein phosphatase. (309 aa)
gabarapGABA(A) receptor-associated protein b. (134 aa)
atg7ATG7 autophagy related 7 homolog (S. cerevisiae). (722 aa)
mlst8MTOR associated protein, LST8 homolog (S. cerevisiae). (326 aa)
igbp1Immunoglobulin (CD79A) binding protein 1. (373 aa)
LOC109982314Si:ch211-63o20.7; Belongs to the protein kinase superfamily. (403 aa)
atg4dCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (504 aa)
atg9aAutophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (822 aa)
atg3Autophagy-related protein 3. (316 aa)
atg10ATG10 autophagy related 10 homolog (S. cerevisiae). (241 aa)
ulk3Unc-51 like kinase 3; Belongs to the protein kinase superfamily. (491 aa)
LOC110000670Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (464 aa)
atg12Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (132 aa)
pik3r4Phosphoinositide-3-kinase, regulatory subunit 4. (878 aa)
ttc14Tetratricopeptide repeat domain 14. (768 aa)
LOC109993731Zgc:92606. (117 aa)
atg4cCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (467 aa)
mtorSerine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2492 aa)
rptorRegulatory associated protein of MTOR, complex 1. (1274 aa)
atg101Autophagy related 101. (218 aa)
atg5Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
ENSLBEP00000015535Uncharacterized protein. (346 aa)
wipi2WD repeat domain, phosphoinositide interacting 2. (381 aa)
WIPI1WD repeat domain, phosphoinositide interacting 1. (440 aa)
ulk2Unc-51 like autophagy activating kinase 2. (1030 aa)
atg13Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. (541 aa)
LOC109991839WD repeat domain, phosphoinositide interacting 1. (473 aa)
atg2aAutophagy related 2A. (1992 aa)
becn1Beclin 1, autophagy related. (430 aa)
LOC109993517Serine/threonine-protein phosphatase. (309 aa)
LOC109978894Uncharacterized protein. (65 aa)
ENSLBEP00000005111S1 motif domain-containing protein. (143 aa)
ENSLBEP00000002067Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (142 aa)
ENSLBEP00000001542Autophagy related 2B. (305 aa)
pik3c3Phosphatidylinositol 3-kinase catalytic subunit type 3. (884 aa)
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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