(63 nodes) Phototransduction network (Labrus bergylta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC109993675	Recoverin 2. (193 aa)
	LOC109997406	Rhodopsin. (349 aa)
	LOC109984790	Guanylate cyclase activator 1C. (187 aa)
	LOC109983615	Uncharacterized protein. (185 aa)
	GRK1	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (545 aa)
	LOC110002301	Rhodopsin. (354 aa)
	LOC110002300	Rhodopsin. (352 aa)
	LOC110002302	Rhodopsin. (352 aa)
	LOC109977487	RGS domain-containing protein. (540 aa)
	LOC109995233	Calmodulin-like 4b. (149 aa)
	rcvrn	Recoverin a. (234 aa)
	RHO	Extra-ocular rhodopsin. (326 aa)
	LOC109983664	Calmodulin 3a (phosphorylase kinase, delta); Belongs to the calmodulin family. (149 aa)
	ENSLBEP00000008730	Uncharacterized protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (273 aa)
	ENSLBEP00000008762	Na_Ca_ex domain-containing protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (269 aa)
	LOC109991821	Regulator of G protein signaling 9a. (443 aa)
	LOC110004863	Cyclic nucleotide gated channel subunit alpha 1b. (610 aa)
	grk7	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (557 aa)
	ENSLBEP00000010156	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b. (84 aa)
	guca1b	Guanylate cyclase activator 1B. (197 aa)
	LOC109998064	Uncharacterized protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (620 aa)
	ENSLBEP00000011867	Rhodopsin. (345 aa)
	LOC109989518	Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family. (231 aa)
	LOC109987853	Si:dkey-44k1.5. (759 aa)
	pde6b	Phosphodiesterase. (864 aa)
	LOC109975819	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (374 aa)
	LOC109985542	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (563 aa)
	tmco3	Transmembrane and coiled-coil domains 3. (680 aa)
	rgs11	Regulator of G protein signaling 11. (473 aa)
	guca1a	Si:ch211-103a14.5. (190 aa)
	LOC109982239	Solute carrier family 24 member 1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (667 aa)
	LOC109982278	Solute carrier family 24 member 1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (586 aa)
	LOC110002554	Recoverin 3. (192 aa)
	LOC109992111	Guanylate cyclase. (1102 aa)
	LOC109986823	Calmodulin-like 4a. (153 aa)
	LOC109983903	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb; Belongs to the semaphorin family. (701 aa)
	LOC109994344	Uncharacterized protein. (194 aa)
	LOC109994339	Uncharacterized protein. (210 aa)
	LOC109998852	Guanylate cyclase activator 1A. (189 aa)
	SLC24A2	Solute carrier family 24 member 2; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (629 aa)
	LOC109982888	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2. (350 aa)
	ENSLBEP00000028137	Cyclic nucleotide gated channel subunit alpha 1a. (645 aa)
	LOC109980617	Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family. (789 aa)
	LOC109990841	Uncharacterized protein; Belongs to the calmodulin family. (209 aa)
	gnat1	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1. (359 aa)
	LOC109995104	Phosphodiesterase 6H. (133 aa)
	LOC109980570	Guanine nucleotide binding protein (G protein), beta polypeptide 1b. (340 aa)
	LOC109982495	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (73 aa)
	LOC109981176	Phosphodiesterase. (845 aa)
	pde6g	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b. (87 aa)
	SLC24A1	Solute carrier family 24 member 1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (743 aa)
	cnga3	Cyclic nucleotide gated channel subunit alpha 3a. (670 aa)
	LOC109996748	Guanylate cyclase activator 1g. (187 aa)
	LOC109996749	Uncharacterized protein. (191 aa)
	LOC109993290	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (559 aa)
	LOC109993294	Guanylate cyclase. (1147 aa)
	ENSLBEP00000034828	Cyclic nucleotide gated channel beta 1a. (739 aa)
	LOC109996767	Calmodulin. (149 aa)
	LOC109999062	Guanylate cyclase. (1076 aa)
	LOC109989843	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (526 aa)
	LOC110002022	Guanylate cyclase. (1102 aa)
	LOC109981866	Regulator of G protein signaling 9b. (472 aa)
	LOC110001518	S-antigen; retina and pineal gland (arrestin) a. (390 aa)

Your Current Organism:

Labrus bergylta

NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSLBEP00000010156	GRK1	ENSLBEP00000010156	ENSLBEP00000002443	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.422
ENSLBEP00000010156	LOC109975819	ENSLBEP00000010156	ENSLBEP00000015985	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.422
ENSLBEP00000010156	LOC109977487	ENSLBEP00000010156	ENSLBEP00000004398	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.	RGS domain-containing protein.	0.836
ENSLBEP00000010156	LOC109980570	ENSLBEP00000010156	ENSLBEP00000030291	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	0.868
ENSLBEP00000010156	LOC109981176	ENSLBEP00000010156	ENSLBEP00000031458	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.	Phosphodiesterase.	0.953
ENSLBEP00000010156	LOC109981866	ENSLBEP00000010156	ENSLBEP00000036939	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.	Regulator of G protein signaling 9b.	0.836
ENSLBEP00000010156	LOC109982495	ENSLBEP00000010156	ENSLBEP00000031077	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.910
ENSLBEP00000010156	LOC109982888	ENSLBEP00000010156	ENSLBEP00000026344	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.	0.985
ENSLBEP00000010156	LOC109985542	ENSLBEP00000010156	ENSLBEP00000016059	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.411
ENSLBEP00000010156	LOC109991821	ENSLBEP00000010156	ENSLBEP00000009210	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.	Regulator of G protein signaling 9a.	0.836
ENSLBEP00000010156	LOC109992111	ENSLBEP00000010156	ENSLBEP00000024195	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.	Guanylate cyclase.	0.897
ENSLBEP00000010156	LOC109993290	ENSLBEP00000010156	ENSLBEP00000033853	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.	0.558
ENSLBEP00000010156	LOC109993294	ENSLBEP00000010156	ENSLBEP00000034390	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.	Guanylate cyclase.	0.866
ENSLBEP00000010156	LOC109995104	ENSLBEP00000010156	ENSLBEP00000029513	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.	Phosphodiesterase 6H.	0.849
ENSLBEP00000010156	LOC109999062	ENSLBEP00000010156	ENSLBEP00000035562	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.	Guanylate cyclase.	0.874
ENSLBEP00000010156	LOC110002022	ENSLBEP00000010156	ENSLBEP00000036348	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.	Guanylate cyclase.	0.866
ENSLBEP00000010156	gnat1	ENSLBEP00000010156	ENSLBEP00000029324	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.	Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.	0.987
ENSLBEP00000010156	guca1b	ENSLBEP00000010156	ENSLBEP00000010844	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.	Guanylate cyclase activator 1B.	0.400
ENSLBEP00000010156	pde6b	ENSLBEP00000010156	ENSLBEP00000015953	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.	Phosphodiesterase.	0.958
ENSLBEP00000010156	rgs11	ENSLBEP00000010156	ENSLBEP00000016392	Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.	Regulator of G protein signaling 11.	0.836