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nnrE nnrE groL1 groL1 queA queA SYN_00045 SYN_00045 dapF dapF murI murI mtnA mtnA SYN_00471 SYN_00471 SYN_00555 SYN_00555 SYN_00576 SYN_00576 hemL hemL fcl fcl SYN_00621 SYN_00621 SYN_03787 SYN_03787 SYN_00683 SYN_00683 dapF-2 dapF-2 SYN_00730 SYN_00730 hisA hisA SYN_00891 SYN_00891 SYN_00938 SYN_00938 SYN_01002 SYN_01002 SYN_01125 SYN_01125 SYN_01299 SYN_01299 SYN_01343 SYN_01343 truA truA SYN_01482 SYN_01482 SYN_01697 SYN_01697 SYN_01763 SYN_01763 truB truB SYN_01800 SYN_01800 groL3 groL3 trpF trpF gmhA gmhA SYN_02039 SYN_02039 SYN_02043 SYN_02043 gyrA gyrA gyrB gyrB SYN_02366 SYN_02366 menF menF purE purE trpF-2 trpF-2 SYN_02487 SYN_02487 trpF-3 trpF-3 SYN_02599 SYN_02599 SYN_02619 SYN_02619 SYN_02641 SYN_02641 SYN_02650 SYN_02650 SYN_02683 SYN_02683 truA-2 truA-2 tig tig topA topA SYN_03790 SYN_03790 SYN_02856 SYN_02856 pgi pgi SYN_02958 SYN_02958 glmM glmM SYN_03119 SYN_03119 SYN_03141 SYN_03141 SYN_03164 SYN_03164 groL2 groL2
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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experimentally determined
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textmining
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nnrEHypothetical kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...] (548 aa)
groL1Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. (544 aa)
queAS-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). (362 aa)
SYN_00045Thioredoxin; Belongs to the thioredoxin family. (110 aa)
dapFDiaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. (277 aa)
murIGlutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. (270 aa)
mtnAMethylthioribose salvage protein; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). (367 aa)
SYN_00471Arabinose-5-phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily. (336 aa)
SYN_00555Peptidyl-prolyl cis-trans isomerase. (533 aa)
SYN_00576dTDP-4-dehydrorhamnose 3,5-epimerase. (151 aa)
hemLGlutamate-1-semialdehyde 2,1-aminomutase. (432 aa)
fclGDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. (322 aa)
SYN_00621Phosphoglycerate mutase. (433 aa)
SYN_03787Thioredoxin-like protein. (90 aa)
SYN_00683Methylmalonyl CoA epimerase. (194 aa)
dapF-2Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. (295 aa)
SYN_00730Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (324 aa)
hisA1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase. (242 aa)
SYN_00891Phosphoglycerate mutase. (409 aa)
SYN_00938Phosphomannomutase. (450 aa)
SYN_01002Phosphoglycerate mutase. (532 aa)
SYN_01125UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (331 aa)
SYN_01299Prephenate dehydratase. (354 aa)
SYN_01343Phosphoglucomutase. (562 aa)
truAtRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (259 aa)
SYN_01482Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (661 aa)
SYN_016973-hydroxydecanoyl-[acyl-carrier-protein] dehydratase. (196 aa)
SYN_01763Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (228 aa)
truBtRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. (312 aa)
SYN_01800Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (333 aa)
groL3Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. (542 aa)
trpFN-(5'-phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family. (230 aa)
gmhAPhosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate. (194 aa)
SYN_02039Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (171 aa)
SYN_02043Hypothetical membrane protein. (258 aa)
gyrADNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (833 aa)
gyrBDNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (800 aa)
SYN_02366Ribose 5-phosphate isomerase. (152 aa)
menFIsochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. (453 aa)
purEPhosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). (171 aa)
trpF-2N-(5'-phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family. (230 aa)
SYN_02487Peptidyl-prolyl cis-trans isomerase. (322 aa)
trpF-3N-(5'-phosphoribosyl)anthranilate isomerase; Belongs to the TrpF family. (249 aa)
SYN_02599Superfamily I DNA and RNA helicase. (287 aa)
SYN_02619O-succinylbenzoate synthase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (375 aa)
SYN_026412,3-bisphosphoglycerate-independent phosphoglycerate mutase 1. (402 aa)
SYN_02650CDP-4-dehydro-6-deoxy-D-glucose 3-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (201 aa)
SYN_02683UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (366 aa)
truA-2tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (328 aa)
tigTrigger factor, ppiase; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. (443 aa)
topADNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (769 aa)
SYN_03790Triosephosphate isomerase. (130 aa)
SYN_02856RNA pseudouridylate synthase S4 domain; Belongs to the pseudouridine synthase RsuA family. (251 aa)
pgiGlucose-6-phosphate isomerase / glucose-6 phosphate 1-epimerase; Bifunctional. (546 aa)
SYN_029586-phosphogluconolactonase/glucosamine-6- phosphate isomerase/deaminase. (319 aa)
glmMPhosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. (449 aa)
SYN_03119Mannose-6-phosphate isomerase / mannose-1-phosphate guanylyltransferase; Bifunctional; Belongs to the mannose-6-phosphate isomerase type 2 family. (509 aa)
SYN_03141Peptidylprolyl isomerase. (364 aa)
SYN_03164Hypothetical cytosolic protein. (783 aa)
groL2Chaperonin GroEL, truncated; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. (545 aa)
Your Current Organism:
Syntrophus aciditrophicus
NCBI taxonomy Id: 56780
Other names: S. aciditrophicus SB, Syntrophus aciditrophicus SB, Syntrophus aciditrophicus str. SB, Syntrophus aciditrophicus strain SB
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