STRINGSTRING
SYN_00531 SYN_00531 SYN_01112 SYN_01112 SYN_02661 SYN_02661 SYN_02652 SYN_02652 SYN_01130 SYN_01130
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SYN_00531UDP-D-glucuronate carboxy-lyase. (310 aa)
SYN_01112UDP-N-acetylglucosamine 4-epimerase. (339 aa)
SYN_02661NAD dependent epimerase/dehydratase family. (318 aa)
SYN_02652CDP-4-dehydro-6-deoxy-D-gulose 4-reductase. (314 aa)
SYN_01130dTDP-glucose 4,6-dehydratase. (331 aa)
Your Current Organism:
Syntrophus aciditrophicus
NCBI taxonomy Id: 56780
Other names: S. aciditrophicus SB, Syntrophus aciditrophicus SB, Syntrophus aciditrophicus str. SB, Syntrophus aciditrophicus strain SB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.