STRINGSTRING
SYN_01263 SYN_01263 SYN_02570 SYN_02570 SYN_01324 SYN_01324 SYN_02722 SYN_02722 SYN_02005 SYN_02005 SYN_02092 SYN_02092 SYN_02543 SYN_02543 SYN_01079 SYN_01079
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SYN_01263ABC-type transport system involved in resistance to organic solvents, ATPase component. (413 aa)
SYN_02570Sensory box ggdef family protein. (354 aa)
SYN_01324Response regulator protein with GGDEF domain. (356 aa)
SYN_02722Sensory box/GGDEF family protein. (294 aa)
SYN_02005Response regulator protein with GGDEF domain. (355 aa)
SYN_02092Fog:ggdef domain membrane protein. (462 aa)
SYN_02543PAS sensory box/GGDEF family protein. (300 aa)
SYN_01079Ggdef family protein / response regulator receiver domain. (498 aa)
Your Current Organism:
Syntrophus aciditrophicus
NCBI taxonomy Id: 56780
Other names: S. aciditrophicus SB, Syntrophus aciditrophicus SB, Syntrophus aciditrophicus str. SB, Syntrophus aciditrophicus strain SB
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