STRINGSTRING
SYN_01054 SYN_01054 SYN_00946 SYN_00946 lolD lolD SYN_00853 SYN_00853 SYN_00839 SYN_00839 SYN_00824 SYN_00824 SYN_00786 SYN_00786 SYN_00785 SYN_00785 SYN_00774 SYN_00774 SYN_00745 SYN_00745 SYN_00610 SYN_00610 SYN_00466 SYN_00466 SYN_00410 SYN_00410 SYN_00367 SYN_00367 SYN_00283 SYN_00283 SYN_00271 SYN_00271 SYN_00242 SYN_00242 SYN_00241 SYN_00241 SYN_00216 SYN_00216 cbiO cbiO SYN_00079 SYN_00079 pstB pstB SYN_00024 SYN_00024 SYN_02224 SYN_02224 SYN_01459 SYN_01459 SYN_01460 SYN_01460 msbA msbA SYN_01666 SYN_01666 SYN_01888 SYN_01888 SYN_01978 SYN_01978 SYN_01994 SYN_01994 SYN_02065 SYN_02065 SYN_02069 SYN_02069 SYN_02171 SYN_02171 SYN_02172 SYN_02172 uvrA uvrA SYN_02656 SYN_02656 SYN_03206 SYN_03206 SYN_01426 SYN_01426 SYN_01263 SYN_01263 SYN_00955 SYN_00955
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SYN_01054iron(III) dicitrate transport ATP-binding protein. (288 aa)
SYN_00946ABC transporter ATP-binding protein. (240 aa)
lolDLipoprotein releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. (223 aa)
SYN_00853ABC transporter ATP-binding commponent. (237 aa)
SYN_00839Tungsten transporter ATP binding protein; Belongs to the ABC transporter superfamily. (365 aa)
SYN_00824ABC transporter ATP-binding protein. (428 aa)
SYN_00786Branched-chain amino acid transport ATP-binding protein. (265 aa)
SYN_00785Branched-chain amino acid transport ATP-binding protein. (235 aa)
SYN_00774ABC transporter ATP-binding protein. (314 aa)
SYN_00745ABC transporter ATP-binding protein. (271 aa)
SYN_00610ATP-binding protein. (538 aa)
SYN_00466ABC transporter ATP-binding protein. (675 aa)
SYN_00410ABC-type transport system, ATP-binding component. (248 aa)
SYN_00367Sulfate transport ATP-binding protein. (262 aa)
SYN_00283ABC transporter ATP-binding protein. (235 aa)
SYN_00271ABC-type molybdate transport system, ATPase component; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family. (351 aa)
SYN_00242Export ABC transporter ATP-binding protein. (309 aa)
SYN_00241Export ABC transporter ATP-binding protein. (310 aa)
SYN_00216ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components. (266 aa)
cbiOABC-type cobalt transport system, ATPase component; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. Presumably responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Cobalt importer (TC 3.A.1.18.1) family. (280 aa)
SYN_00079ABC-type sugar transport systems, ATPase component; Belongs to the ABC transporter superfamily. (421 aa)
pstBABC-type phosphate transport system, ATPase component; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (256 aa)
SYN_00024ABC transporter ATP-binding protein. (239 aa)
SYN_02224ABC-type phosphate transport system, ATPase component; Belongs to the ABC transporter superfamily. (237 aa)
SYN_01459Export ABC transporter ATP-binding protein. (266 aa)
SYN_01460Export ABC transporter ATP-binding protein. (270 aa)
msbAPhospholipid-lipopolysaccharide ABC transporter; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. (601 aa)
SYN_01666Antibiotic export ATP-binding protein. (261 aa)
SYN_01888ATPase components of ABC transporters with duplicated ATPase domains. (501 aa)
SYN_01978ABC transporter ATP-binding protein. (561 aa)
SYN_01994ABC transporter ATP-binding protein. (244 aa)
SYN_02065Export ABC transporter ATP-binding protein / export ABC transporter permease protein. (931 aa)
SYN_02069ABC-type transport system involved in resistance to organic solvents, ATPase component. (264 aa)
SYN_02171Oligopeptide transport ATP-binding protein; Belongs to the ABC transporter superfamily. (327 aa)
SYN_02172Oligopeptide transport ATP-binding protein; Belongs to the ABC transporter superfamily. (338 aa)
uvrAExcinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (940 aa)
SYN_02656ABC-type polysaccharide/polyol phosphate transport protein, ATPase component. (455 aa)
SYN_03206ABC transporter ATP-binding protein. (266 aa)
SYN_01426ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component. (278 aa)
SYN_01263ABC-type transport system involved in resistance to organic solvents, ATPase component. (413 aa)
SYN_00955ABC-type Mn/Zn transport system ATPase component. (258 aa)
Your Current Organism:
Syntrophus aciditrophicus
NCBI taxonomy Id: 56780
Other names: S. aciditrophicus SB, Syntrophus aciditrophicus SB, Syntrophus aciditrophicus str. SB, Syntrophus aciditrophicus strain SB
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.