(10 nodes) CoA-binding network (Syntrophus aciditrophicus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SYN_01949	acyl-CoA synthetase; NDP forming. (727 aa)
	SYN_00049	acetyl-CoA synthetase beta subunit. (701 aa)
	SYN_00647	acetyl-CoA synthetase. (482 aa)
	SYN_00748	acetyl-CoA synthetase beta subunit. (773 aa)
	SYN_02112	acetyl-CoA synthetase beta subunit. (697 aa)
	sucD	succinyl-CoA synthetase alpha chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (291 aa)
	SYN_02520	CoA binding protein. (153 aa)
	SYN_02607	acetyl-CoA synthetase / acetyltransferase (GNAT) family protein. (899 aa)
	SYN_02609	acetyl-CoA synthetase beta subunit. (700 aa)
	SYN_02878	acetyl-CoA synthetase / acetyltransferase (GNAT) family protein. (918 aa)

Your Current Organism:

Syntrophus aciditrophicus

NCBI taxonomy Id: 56780
Other names: S. aciditrophicus SB, Syntrophus aciditrophicus SB, Syntrophus aciditrophicus str. SB, Syntrophus aciditrophicus strain SB

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SYN_00049	SYN_02112	SYN_00049	SYN_02112	acetyl-CoA synthetase beta subunit.	acetyl-CoA synthetase beta subunit.	0.920
SYN_00049	SYN_02609	SYN_00049	SYN_02609	acetyl-CoA synthetase beta subunit.	acetyl-CoA synthetase beta subunit.	0.926
SYN_00049	sucD	SYN_00049	SYN_02502	acetyl-CoA synthetase beta subunit.	succinyl-CoA synthetase alpha chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.	0.805
SYN_02112	SYN_00049	SYN_02112	SYN_00049	acetyl-CoA synthetase beta subunit.	acetyl-CoA synthetase beta subunit.	0.920
SYN_02112	SYN_02609	SYN_02112	SYN_02609	acetyl-CoA synthetase beta subunit.	acetyl-CoA synthetase beta subunit.	0.924
SYN_02112	sucD	SYN_02112	SYN_02502	acetyl-CoA synthetase beta subunit.	succinyl-CoA synthetase alpha chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.	0.805
SYN_02607	SYN_02609	SYN_02607	SYN_02609	acetyl-CoA synthetase / acetyltransferase (GNAT) family protein.	acetyl-CoA synthetase beta subunit.	0.585
SYN_02609	SYN_00049	SYN_02609	SYN_00049	acetyl-CoA synthetase beta subunit.	acetyl-CoA synthetase beta subunit.	0.926
SYN_02609	SYN_02112	SYN_02609	SYN_02112	acetyl-CoA synthetase beta subunit.	acetyl-CoA synthetase beta subunit.	0.924
SYN_02609	SYN_02607	SYN_02609	SYN_02607	acetyl-CoA synthetase beta subunit.	acetyl-CoA synthetase / acetyltransferase (GNAT) family protein.	0.585
SYN_02609	sucD	SYN_02609	SYN_02502	acetyl-CoA synthetase beta subunit.	succinyl-CoA synthetase alpha chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.	0.805
sucD	SYN_00049	SYN_02502	SYN_00049	succinyl-CoA synthetase alpha chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.	acetyl-CoA synthetase beta subunit.	0.805
sucD	SYN_02112	SYN_02502	SYN_02112	succinyl-CoA synthetase alpha chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.	acetyl-CoA synthetase beta subunit.	0.805
sucD	SYN_02609	SYN_02502	SYN_02609	succinyl-CoA synthetase alpha chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.	acetyl-CoA synthetase beta subunit.	0.805