STRINGSTRING
SYN_03169 SYN_03169 SYN_00443 SYN_00443 SYN_00032 SYN_00032 SYN_00224 SYN_00224 SYN_01021 SYN_01021 SYN_02167 SYN_02167 SYN_02183 SYN_02183 SYN_02184 SYN_02184
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SYN_03169Hypothetical membrane protein. (270 aa)
SYN_00443Hypothetical membrane protein. (313 aa)
SYN_00032Cell wall degradation protein. (625 aa)
SYN_00224Peptidoglycan binding protein. (567 aa)
SYN_01021erfK/ybiS/ycfS/ynhG family protein. (218 aa)
SYN_02167Tetratricopeptide repeat family protein. (498 aa)
SYN_02183Protein ERFK. (314 aa)
SYN_02184erfK/srfK family protein. (445 aa)
Your Current Organism:
Syntrophus aciditrophicus
NCBI taxonomy Id: 56780
Other names: S. aciditrophicus SB, Syntrophus aciditrophicus SB, Syntrophus aciditrophicus str. SB, Syntrophus aciditrophicus strain SB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.