STRINGSTRING
SYN_00304 SYN_00304 SYN_00551 SYN_00551 SYN_01571 SYN_01571 SYN_01739 SYN_01739 SYN_01998 SYN_01998 SYN_02082 SYN_02082 SYN_02260 SYN_02260
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SYN_00304Multimodular transpeptidase-transglycosylase. (674 aa)
SYN_00551Cell elongation specific D,D-transpeptidase. (630 aa)
SYN_01571Beta-lactamase class A. (394 aa)
SYN_01739Division specific D,D-transpeptidase / cell division protein. (667 aa)
SYN_01998Multimodular transpeptidase-transglycosylase. (687 aa)
SYN_02082Membrane carboxypeptidase; Penicillin-binding protein. (1052 aa)
SYN_02260D-alanyl-D-alanine serine-type carboxypeptidase; Belongs to the peptidase S11 family. (310 aa)
Your Current Organism:
Syntrophus aciditrophicus
NCBI taxonomy Id: 56780
Other names: S. aciditrophicus SB, Syntrophus aciditrophicus SB, Syntrophus aciditrophicus str. SB, Syntrophus aciditrophicus strain SB
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