STRINGSTRING
SYN_00527 SYN_00527 SYN_00915 SYN_00915 SYN_01558 SYN_01558 SYN_00194 SYN_00194 SYN_01706 SYN_01706 SYN_02023 SYN_02023 SYN_02024 SYN_02024
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SYN_00527Trypsin-like serine protease; Belongs to the peptidase S1C family. (506 aa)
SYN_00915Membrane metalloprotease. (366 aa)
SYN_01558General secretion pathway protein C. (285 aa)
SYN_00194Periplasmic protease; Belongs to the peptidase S41A family. (435 aa)
SYN_01706Endopeptidase; Belongs to the peptidase S1C family. (494 aa)
SYN_02023Endopeptidase. (386 aa)
SYN_02024Carboxy-terminal processing protease precursor; Belongs to the peptidase S41A family. (698 aa)
Your Current Organism:
Syntrophus aciditrophicus
NCBI taxonomy Id: 56780
Other names: S. aciditrophicus SB, Syntrophus aciditrophicus SB, Syntrophus aciditrophicus str. SB, Syntrophus aciditrophicus strain SB
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