STRINGSTRING
SYN_00061 SYN_00061 SYN_00432 SYN_00432 SYN_01236 SYN_01236 SYN_01808 SYN_01808 SYN_02092 SYN_02092 SYN_02359 SYN_02359 SYN_02714 SYN_02714 SYN_02721 SYN_02721
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SYN_00061Phosphate regulon sensor protein. (583 aa)
SYN_00432Methyl-accepting chemotaxis protein. (686 aa)
SYN_01236Methyl-accepting chemotaxis protein. (688 aa)
SYN_01808Signal transduction histidine kinase. (503 aa)
SYN_02092Fog:ggdef domain membrane protein. (462 aa)
SYN_02359Serine phosphatase RsbU, regulator of sigma subunit. (652 aa)
SYN_02714Signal transduction histidine kinase involved in nitrogen metabolism regulation. (740 aa)
SYN_02721HD domain / HAMP domain protein. (484 aa)
Your Current Organism:
Syntrophus aciditrophicus
NCBI taxonomy Id: 56780
Other names: S. aciditrophicus SB, Syntrophus aciditrophicus SB, Syntrophus aciditrophicus str. SB, Syntrophus aciditrophicus strain SB
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