STRINGSTRING
SYN_00265 SYN_00265 SYN_00908 SYN_00908 SYN_01184 SYN_01184 proB proB SYN_01365 SYN_01365 SYN_01577 SYN_01577 proA proA proC proC SYN_02392 SYN_02392 SYN_02393 SYN_02393 SYN_02937 SYN_02937
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SYN_00265NAD-dependent aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (459 aa)
SYN_00908Aspartate aminotransferase. (400 aa)
SYN_01184Pyruvoyl-dependent arginine decarboxylase. (181 aa)
proBGlutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. (385 aa)
SYN_01365Pyruvoyl-dependent arginine decarboxylase (PvlArgDC). (198 aa)
SYN_01577Pyruvoyl-dependent arginine decarboxylase (PvlArgDC). (182 aa)
proAGamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. (418 aa)
proCPyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. (272 aa)
SYN_02392N-carbamoylputrescine amidase. (291 aa)
SYN_02393Peptidylarginine deiminase related enzyme; Belongs to the agmatine deiminase family. (392 aa)
SYN_02937Aspartate aminotransferase. (395 aa)
Your Current Organism:
Syntrophus aciditrophicus
NCBI taxonomy Id: 56780
Other names: S. aciditrophicus SB, Syntrophus aciditrophicus SB, Syntrophus aciditrophicus str. SB, Syntrophus aciditrophicus strain SB
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