STRINGSTRING
SYN_00606 SYN_00606 SYN_01213 SYN_01213 SYN_01242 SYN_01242 SYN_01613 SYN_01613 SYN_01628 SYN_01628 SYN_01630 SYN_01630 SYN_02382 SYN_02382 hcp hcp SYN_02615 SYN_02615 SYN_02616 SYN_02616 SYN_02875 SYN_02875 hcp-2 hcp-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SYN_00606Glutamate synthase (NADPH). (471 aa)
SYN_01213Carbamate kinase; Belongs to the carbamate kinase family. (323 aa)
SYN_01242Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (428 aa)
SYN_01613Glutamine synthetase. (698 aa)
SYN_01628Glutamine synthetase. (452 aa)
SYN_01630Glutamate synthase (NADPH); Belongs to the glutamate synthase family. (544 aa)
SYN_02382Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (453 aa)
hcpHybrid cluster protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. (542 aa)
SYN_02615Cytochrome c-type protein. (153 aa)
SYN_02616Cytochrome c552; Belongs to the cytochrome c-552 family. (427 aa)
SYN_02875Carbonic anhydrase. (204 aa)
hcp-2Hybrid cluster protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. (542 aa)
Your Current Organism:
Syntrophus aciditrophicus
NCBI taxonomy Id: 56780
Other names: S. aciditrophicus SB, Syntrophus aciditrophicus SB, Syntrophus aciditrophicus str. SB, Syntrophus aciditrophicus strain SB
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