Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BAE46_04410 | OFA31735.1 | BAE46_04410 | BAE46_08145 | DUF4442 domain-containing protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.701 |
| BAE46_04410 | OFA32672.1 | BAE46_04410 | BAE46_02605 | DUF4442 domain-containing protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.714 |
| BAE46_04410 | OFA32959.1 | BAE46_04410 | BAE46_02665 | DUF4442 domain-containing protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.547 |
| BAE46_04410 | OFA33462.1 | BAE46_04410 | BAE46_01810 | DUF4442 domain-containing protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.598 |
| BAE46_04410 | ampE | BAE46_04410 | BAE46_05335 | DUF4442 domain-containing protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.745 |
| BAE46_04410 | metJ | BAE46_04410 | BAE46_02590 | DUF4442 domain-containing protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis. | 0.697 |
| BAE46_04410 | rraB | BAE46_04410 | BAE46_10990 | DUF4442 domain-containing protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease E inhibitor B; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome. | 0.743 |
| BAE46_04410 | syd | BAE46_04410 | BAE46_05895 | DUF4442 domain-containing protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | SecY-interacting protein; Interacts with the SecY protein in vivo. May bind preferentially to an uncomplexed state of SecY, thus functioning either as a chelating agent for excess SecY in the cell or as a regulatory factor that negatively controls the translocase function. Belongs to the Syd family. | 0.647 |
| OFA31735.1 | BAE46_04410 | BAE46_08145 | BAE46_04410 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DUF4442 domain-containing protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.701 |
| OFA31735.1 | OFA32672.1 | BAE46_08145 | BAE46_02605 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.698 |
| OFA31735.1 | OFA32959.1 | BAE46_08145 | BAE46_02665 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.682 |
| OFA31735.1 | OFA33462.1 | BAE46_08145 | BAE46_01810 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.773 |
| OFA31735.1 | ampE | BAE46_08145 | BAE46_05335 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.682 |
| OFA31735.1 | fadR | BAE46_08145 | BAE46_07810 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fatty acid metabolism regulator; Multifunctional regulator of fatty acid metabolism. | 0.689 |
| OFA31735.1 | metJ | BAE46_08145 | BAE46_02590 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis. | 0.746 |
| OFA31735.1 | ndpA | BAE46_08145 | BAE46_01800 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nucleoid-associated protein YejK; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.728 |
| OFA31735.1 | rraB | BAE46_08145 | BAE46_10990 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease E inhibitor B; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome. | 0.775 |
| OFA31735.1 | syd | BAE46_08145 | BAE46_05895 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | SecY-interacting protein; Interacts with the SecY protein in vivo. May bind preferentially to an uncomplexed state of SecY, thus functioning either as a chelating agent for excess SecY in the cell or as a regulatory factor that negatively controls the translocase function. Belongs to the Syd family. | 0.738 |
| OFA32672.1 | BAE46_04410 | BAE46_02605 | BAE46_04410 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DUF4442 domain-containing protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.714 |
| OFA32672.1 | OFA31735.1 | BAE46_02605 | BAE46_08145 | Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.698 |
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