(30 nodes) ER to Golgi transport vesicle membrane network (Macleaya cordata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BVC80_209g302	WD40 repeat; Belongs to the WD repeat SEC13 family. (301 aa)
	BVC80_717g6	WD40 repeat. (1116 aa)
	BVC80_1699g7	Synaptobrevin; Belongs to the synaptobrevin family. (218 aa)
	BVC80_1809g1	Protein transport protein sec16. (1415 aa)
	BVC80_9099g219	Zinc finger protein. (1015 aa)
	BVC80_9091g58	Small GTPase superfamily; Belongs to the small GTPase superfamily. SAR1 family. (193 aa)
	BVC80_9091g57	Small GTPase superfamily; Belongs to the small GTPase superfamily. SAR1 family. (193 aa)
	BVC80_8521g7	Protein transport protein sec16. (1385 aa)
	BVC80_1707g135	Zinc finger protein. (796 aa)
	BVC80_209g116	Vesicle tethering protein Uso1/P115-like. (925 aa)
	BVC80_1665g44	Synaptobrevin; Belongs to the synaptobrevin family. (218 aa)
	BVC80_235g22	Zinc finger protein. (1001 aa)
	BVC80_1833g145	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (823 aa)
	BVC80_1543g267	Small GTPase superfamily; Belongs to the small GTPase superfamily. SAR1 family. (193 aa)
	BVC80_1543g268	Small GTPase superfamily; Belongs to the small GTPase superfamily. SAR1 family. (193 aa)
	BVC80_1543g95	Target SNARE coiled-coil domain. (269 aa)
	BVC80_8329g5	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (869 aa)
	BVC80_1315g11	Vacuolar ATPase assembly integral membrane protein VMA21-like domain. (75 aa)
	BVC80_1369g12	Protein transport protein sec16. (1406 aa)
	BVC80_9023g37	WD40 repeat; Belongs to the WD repeat SEC13 family. (303 aa)
	BVC80_9025g4	Membrin; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network. (225 aa)
	BVC80_379g61	Target SNARE coiled-coil domain. (268 aa)
	BVC80_1157g20	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (775 aa)
	BVC80_9013g42	Vesicle transport v-SNARE. (197 aa)
	BVC80_5665g1	Uncharacterized protein. (498 aa)
	BVC80_9003g9	Vesicle transport v-SNARE. (221 aa)
	BVC80_1175g61	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (874 aa)
	BVC80_9101g195	Zinc finger protein. (1098 aa)
	BVC80_9097g4	Vesicle transport v-SNARE. (221 aa)
	BVC80_901g22	Vesicle tethering protein Uso1/P115-like. (914 aa)

Your Current Organism:

Macleaya cordata

NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BVC80_1157g20	BVC80_1175g61	A0A200QRE5	A0A200QIN3	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.525
BVC80_1157g20	BVC80_1369g12	A0A200QRE5	A0A200QVC2	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Protein transport protein sec16.	0.802
BVC80_1157g20	BVC80_1543g267	A0A200QRE5	A0A200R2A9	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Small GTPase superfamily; Belongs to the small GTPase superfamily. SAR1 family.	0.771
BVC80_1157g20	BVC80_1543g268	A0A200QRE5	A0A200R259	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Small GTPase superfamily; Belongs to the small GTPase superfamily. SAR1 family.	0.771
BVC80_1157g20	BVC80_1665g44	A0A200QRE5	A0A200RBJ2	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Synaptobrevin; Belongs to the synaptobrevin family.	0.802
BVC80_1157g20	BVC80_1699g7	A0A200QRE5	A0A200PPD7	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Synaptobrevin; Belongs to the synaptobrevin family.	0.802
BVC80_1157g20	BVC80_1707g135	A0A200QRE5	A0A200Q6B0	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Zinc finger protein.	0.917
BVC80_1157g20	BVC80_1809g1	A0A200QRE5	A0A200PSH9	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Protein transport protein sec16.	0.802
BVC80_1157g20	BVC80_209g116	A0A200QRE5	A0A200QD55	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Vesicle tethering protein Uso1/P115-like.	0.635
BVC80_1157g20	BVC80_209g302	A0A200QRE5	A0A200QDT5	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	WD40 repeat; Belongs to the WD repeat SEC13 family.	0.939
BVC80_1157g20	BVC80_235g22	A0A200QRE5	A0A200RB13	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Zinc finger protein.	0.957
BVC80_1157g20	BVC80_5665g1	A0A200QRE5	A0A200QM72	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Uncharacterized protein.	0.802
BVC80_1157g20	BVC80_717g6	A0A200QRE5	A0A200PM63	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	WD40 repeat.	0.981
BVC80_1157g20	BVC80_8329g5	A0A200QRE5	A0A200R0N1	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.919
BVC80_1157g20	BVC80_8521g7	A0A200QRE5	A0A200Q2W2	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Protein transport protein sec16.	0.802
BVC80_1157g20	BVC80_901g22	A0A200QRE5	A0A200QEM7	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Vesicle tethering protein Uso1/P115-like.	0.635
BVC80_1157g20	BVC80_9023g37	A0A200QRE5	A0A200QV31	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	WD40 repeat; Belongs to the WD repeat SEC13 family.	0.939
BVC80_1157g20	BVC80_9025g4	A0A200QRE5	A0A200QUT7	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Membrin; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.	0.707
BVC80_1157g20	BVC80_9091g57	A0A200QRE5	A0A200PWG5	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Small GTPase superfamily; Belongs to the small GTPase superfamily. SAR1 family.	0.771
BVC80_1157g20	BVC80_9091g58	A0A200QRE5	A0A200PWE5	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	Small GTPase superfamily; Belongs to the small GTPase superfamily. SAR1 family.	0.771