(7 nodes) Elongator holoenzyme complex network (Macleaya cordata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BVC80_1211g31	Elongator complex protein 5. (374 aa)
	BVC80_8847g30	Chromatin associated protein KTI12. (252 aa)
	BVC80_8325g6	Elongator complex protein 4. (365 aa)
	BVC80_1835g747	Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family. (1337 aa)
	BVC80_1065g53	Elongator protein 3/MiaB/NifB. (453 aa)
	BVC80_8497g5	WD40 repeat. (846 aa)
	BVC80_1835g635	Uncharacterized protein family UPF0405. (258 aa)

Your Current Organism:

Macleaya cordata

NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BVC80_1065g53	BVC80_1835g635	A0A200RCQ4	A0A200R655	Elongator protein 3/MiaB/NifB.	Uncharacterized protein family UPF0405.	0.630
BVC80_1065g53	BVC80_1835g747	A0A200RCQ4	A0A200R6J2	Elongator protein 3/MiaB/NifB.	Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.	0.980
BVC80_1065g53	BVC80_8325g6	A0A200RCQ4	A0A200PZ50	Elongator protein 3/MiaB/NifB.	Elongator complex protein 4.	0.968
BVC80_1065g53	BVC80_8497g5	A0A200RCQ4	A0A200QXY9	Elongator protein 3/MiaB/NifB.	WD40 repeat.	0.967
BVC80_1065g53	BVC80_8847g30	A0A200RCQ4	A0A200PZY3	Elongator protein 3/MiaB/NifB.	Chromatin associated protein KTI12.	0.901
BVC80_1211g31	BVC80_1835g635	A0A200Q3D3	A0A200R655	Elongator complex protein 5.	Uncharacterized protein family UPF0405.	0.580
BVC80_1211g31	BVC80_1835g747	A0A200Q3D3	A0A200R6J2	Elongator complex protein 5.	Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.	0.624
BVC80_1211g31	BVC80_8325g6	A0A200Q3D3	A0A200PZ50	Elongator complex protein 5.	Elongator complex protein 4.	0.617
BVC80_1835g635	BVC80_1065g53	A0A200R655	A0A200RCQ4	Uncharacterized protein family UPF0405.	Elongator protein 3/MiaB/NifB.	0.630
BVC80_1835g635	BVC80_1211g31	A0A200R655	A0A200Q3D3	Uncharacterized protein family UPF0405.	Elongator complex protein 5.	0.580
BVC80_1835g635	BVC80_1835g747	A0A200R655	A0A200R6J2	Uncharacterized protein family UPF0405.	Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.	0.744
BVC80_1835g635	BVC80_8325g6	A0A200R655	A0A200PZ50	Uncharacterized protein family UPF0405.	Elongator complex protein 4.	0.977
BVC80_1835g635	BVC80_8497g5	A0A200R655	A0A200QXY9	Uncharacterized protein family UPF0405.	WD40 repeat.	0.480
BVC80_1835g747	BVC80_1065g53	A0A200R6J2	A0A200RCQ4	Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.	Elongator protein 3/MiaB/NifB.	0.980
BVC80_1835g747	BVC80_1211g31	A0A200R6J2	A0A200Q3D3	Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.	Elongator complex protein 5.	0.624
BVC80_1835g747	BVC80_1835g635	A0A200R6J2	A0A200R655	Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.	Uncharacterized protein family UPF0405.	0.744
BVC80_1835g747	BVC80_8325g6	A0A200R6J2	A0A200PZ50	Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.	Elongator complex protein 4.	0.989
BVC80_1835g747	BVC80_8497g5	A0A200R6J2	A0A200QXY9	Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.	WD40 repeat.	0.981
BVC80_1835g747	BVC80_8847g30	A0A200R6J2	A0A200PZY3	Elongator complex protein 1; Component of the RNA polymerase II elongator complex, a multiprotein complex associated with the RNA polymerase II (Pol II) holoenzyme, and which is involved in transcriptional elongation. Belongs to the ELP1/IKA1 family.	Chromatin associated protein KTI12.	0.873
BVC80_8325g6	BVC80_1065g53	A0A200PZ50	A0A200RCQ4	Elongator complex protein 4.	Elongator protein 3/MiaB/NifB.	0.968