STRINGSTRING
BVC80_1781g33 BVC80_1781g33 BVC80_565g14 BVC80_565g14 BVC80_1007g3 BVC80_1007g3 BVC80_209g58 BVC80_209g58 BVC80_1289g20 BVC80_1289g20 BVC80_9099g124 BVC80_9099g124 BVC80_479g36 BVC80_479g36 BVC80_1543g213 BVC80_1543g213 BVC80_1837g469 BVC80_1837g469 BVC80_8769g17 BVC80_8769g17 BVC80_7967g3 BVC80_7967g3 BVC80_8951g27 BVC80_8951g27 BVC80_1065g118 BVC80_1065g118 BVC80_1065g117 BVC80_1065g117
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BVC80_1781g33U box domain. (152 aa)
BVC80_565g14Ubiquitin-conjugating enzyme. (156 aa)
BVC80_1007g3WD40 repeat. (515 aa)
BVC80_209g58Zinc finger protein. (411 aa)
BVC80_1289g20Ubiquitin-conjugating enzyme. (183 aa)
BVC80_9099g124WD40 repeat. (523 aa)
BVC80_479g36Ubiquitin-conjugating enzyme. (182 aa)
BVC80_1543g213Ubiquitin-conjugating enzyme. (329 aa)
BVC80_1837g469Zinc finger protein. (477 aa)
BVC80_8769g17Zinc finger protein. (404 aa)
BVC80_7967g3Ubiquitin-conjugating enzyme. (144 aa)
BVC80_8951g27Ubiquitin-conjugating enzyme. (537 aa)
BVC80_1065g118Von Willebrand factor. (355 aa)
BVC80_1065g117Von Willebrand factor. (464 aa)
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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