(13 nodes) Syntaxin, N-terminal domain network (Macleaya cordata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BVC80_155g14	Target SNARE coiled-coil domain; Belongs to the syntaxin family. (305 aa)
	BVC80_9077g10	Target SNARE coiled-coil domain; Belongs to the syntaxin family. (302 aa)
	BVC80_9081g21	Target SNARE coiled-coil domain; Belongs to the syntaxin family. (308 aa)
	BVC80_9091g92	Target SNARE coiled-coil domain. (324 aa)
	BVC80_9095g75	Target SNARE coiled-coil domain; Belongs to the syntaxin family. (347 aa)
	BVC80_1117g53	Target SNARE coiled-coil domain; Belongs to the syntaxin family. (300 aa)
	BVC80_1289g97	Target SNARE coiled-coil domain; Belongs to the syntaxin family. (306 aa)
	BVC80_1289g96	Syntaxin. (451 aa)
	BVC80_9101g257	Target SNARE coiled-coil domain. (266 aa)
	BVC80_1751g80	Target SNARE coiled-coil domain; Belongs to the syntaxin family. (317 aa)
	BVC80_1741g132	Target SNARE coiled-coil domain; Belongs to the syntaxin family. (309 aa)
	BVC80_1781g22	Target SNARE coiled-coil domain; Belongs to the syntaxin family. (302 aa)
	BVC80_9045g28	Target SNARE coiled-coil domain; Belongs to the syntaxin family. (332 aa)

Your Current Organism:

Macleaya cordata

NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BVC80_1117g53	BVC80_9095g75	A0A200Q9B3	A0A200PXF4	Target SNARE coiled-coil domain; Belongs to the syntaxin family.	Target SNARE coiled-coil domain; Belongs to the syntaxin family.	0.408
BVC80_1117g53	BVC80_9101g257	A0A200Q9B3	A0A200QGT1	Target SNARE coiled-coil domain; Belongs to the syntaxin family.	Target SNARE coiled-coil domain.	0.408
BVC80_1289g97	BVC80_9095g75	A0A200Q9I9	A0A200PXF4	Target SNARE coiled-coil domain; Belongs to the syntaxin family.	Target SNARE coiled-coil domain; Belongs to the syntaxin family.	0.426
BVC80_1289g97	BVC80_9101g257	A0A200Q9I9	A0A200QGT1	Target SNARE coiled-coil domain; Belongs to the syntaxin family.	Target SNARE coiled-coil domain.	0.426
BVC80_1741g132	BVC80_9091g92	A0A200QL13	A0A200PWN1	Target SNARE coiled-coil domain; Belongs to the syntaxin family.	Target SNARE coiled-coil domain.	0.404
BVC80_1741g132	BVC80_9095g75	A0A200QL13	A0A200PXF4	Target SNARE coiled-coil domain; Belongs to the syntaxin family.	Target SNARE coiled-coil domain; Belongs to the syntaxin family.	0.465
BVC80_1741g132	BVC80_9101g257	A0A200QL13	A0A200QGT1	Target SNARE coiled-coil domain; Belongs to the syntaxin family.	Target SNARE coiled-coil domain.	0.465
BVC80_9045g28	BVC80_9095g75	A0A200R341	A0A200PXF4	Target SNARE coiled-coil domain; Belongs to the syntaxin family.	Target SNARE coiled-coil domain; Belongs to the syntaxin family.	0.426
BVC80_9045g28	BVC80_9101g257	A0A200R341	A0A200QGT1	Target SNARE coiled-coil domain; Belongs to the syntaxin family.	Target SNARE coiled-coil domain.	0.426
BVC80_9077g10	BVC80_9095g75	A0A200PLK0	A0A200PXF4	Target SNARE coiled-coil domain; Belongs to the syntaxin family.	Target SNARE coiled-coil domain; Belongs to the syntaxin family.	0.408
BVC80_9077g10	BVC80_9101g257	A0A200PLK0	A0A200QGT1	Target SNARE coiled-coil domain; Belongs to the syntaxin family.	Target SNARE coiled-coil domain.	0.408
BVC80_9081g21	BVC80_9091g92	A0A200PRP9	A0A200PWN1	Target SNARE coiled-coil domain; Belongs to the syntaxin family.	Target SNARE coiled-coil domain.	0.404
BVC80_9081g21	BVC80_9095g75	A0A200PRP9	A0A200PXF4	Target SNARE coiled-coil domain; Belongs to the syntaxin family.	Target SNARE coiled-coil domain; Belongs to the syntaxin family.	0.465
BVC80_9081g21	BVC80_9101g257	A0A200PRP9	A0A200QGT1	Target SNARE coiled-coil domain; Belongs to the syntaxin family.	Target SNARE coiled-coil domain.	0.465
BVC80_9091g92	BVC80_1741g132	A0A200PWN1	A0A200QL13	Target SNARE coiled-coil domain.	Target SNARE coiled-coil domain; Belongs to the syntaxin family.	0.404
BVC80_9091g92	BVC80_9081g21	A0A200PWN1	A0A200PRP9	Target SNARE coiled-coil domain.	Target SNARE coiled-coil domain; Belongs to the syntaxin family.	0.404
BVC80_9091g92	BVC80_9095g75	A0A200PWN1	A0A200PXF4	Target SNARE coiled-coil domain.	Target SNARE coiled-coil domain; Belongs to the syntaxin family.	0.639
BVC80_9091g92	BVC80_9101g257	A0A200PWN1	A0A200QGT1	Target SNARE coiled-coil domain.	Target SNARE coiled-coil domain.	0.639
BVC80_9095g75	BVC80_1117g53	A0A200PXF4	A0A200Q9B3	Target SNARE coiled-coil domain; Belongs to the syntaxin family.	Target SNARE coiled-coil domain; Belongs to the syntaxin family.	0.408
BVC80_9095g75	BVC80_1289g97	A0A200PXF4	A0A200Q9I9	Target SNARE coiled-coil domain; Belongs to the syntaxin family.	Target SNARE coiled-coil domain; Belongs to the syntaxin family.	0.426