STRINGSTRING
GCA_000406125_00055 GCA_000406125_00055 pitA pitA GCA_000406125_00057 GCA_000406125_00057 phoA phoA GCA_000406125_01092 GCA_000406125_01092 phnF phnF GCA_000406125_01453 GCA_000406125_01453 phnG phnG phnH phnH GCA_000406125_01456 GCA_000406125_01456 GCA_000406125_01457 GCA_000406125_01457 phnK phnK phnL phnL phnM phnM phnN phnN phnP phnP phnC phnC phnD phnD phnE phnE phnE-2 phnE-2 nudB nudB thiK thiK pstB pstB pstA pstA GCA_000406125_02867 GCA_000406125_02867 rsgA rsgA pstS pstS pstC pstC pstA-2 pstA-2 pstB-2 pstB-2 phoU phoU
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_000406125_00055Unannotated protein. (395 aa)
pitAUnannotated protein. (347 aa)
GCA_000406125_00057Unannotated protein. (155 aa)
phoAUnannotated protein; Belongs to the alkaline phosphatase family. (467 aa)
GCA_000406125_01092Unannotated protein. (324 aa)
phnFUnannotated protein. (136 aa)
GCA_000406125_01453Unannotated protein. (113 aa)
phnGUnannotated protein. (149 aa)
phnHUnannotated protein. (191 aa)
GCA_000406125_01456Unannotated protein. (363 aa)
GCA_000406125_01457Unannotated protein; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family. (284 aa)
phnKUnannotated protein. (283 aa)
phnLUnannotated protein. (233 aa)
phnMUnannotated protein. (383 aa)
phnNUnannotated protein; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP). (186 aa)
phnPUnannotated protein. (249 aa)
phnCUnannotated protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. (289 aa)
phnDUnannotated protein. (310 aa)
phnEUnannotated protein. (288 aa)
phnE-2Unannotated protein. (298 aa)
nudBUnannotated protein. (149 aa)
thiKUnannotated protein; Catalyzes the phosphorylation of thiamine to thiamine phosphate. (287 aa)
pstBUnannotated protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (271 aa)
pstAUnannotated protein. (548 aa)
GCA_000406125_02867Unannotated protein. (718 aa)
rsgAUnannotated protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. (222 aa)
pstSUnannotated protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. (346 aa)
pstCUnannotated protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (327 aa)
pstA-2Unannotated protein. (295 aa)
pstB-2Unannotated protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (258 aa)
phoUUnannotated protein; Part of the phosphate (Pho) regulon, which plays a key role in phosphate homeostasis. PhoU is essential for the repression of the Pho regulon at high phosphate conditions. (243 aa)
Your Current Organism:
Dickeya sp. NCPPB569
NCBI taxonomy Id: 568768
Other names: D. sp. NCPPB 569, Dickeya sp. NCPPB 569
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