STRINGSTRING
GCA_000406125_02831 GCA_000406125_02831 fadI fadI fadA fadA fabB fabB fabH fabH fabF fabF GCA_000406125_00891 GCA_000406125_00891 GCA_000406125_00887 GCA_000406125_00887 GCA_000406125_00886 GCA_000406125_00886 GCA_000406125_00499 GCA_000406125_00499 GCA_000406125_00420 GCA_000406125_00420 GCA_000406125_00412 GCA_000406125_00412 GCA_000406125_00400 GCA_000406125_00400
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_000406125_02831Unannotated protein. (5344 aa)
fadIUnannotated protein; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. (439 aa)
fadAUnannotated protein; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. (387 aa)
fabBUnannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (406 aa)
fabHUnannotated protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. (316 aa)
fabFUnannotated protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (412 aa)
GCA_000406125_00891Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (381 aa)
GCA_000406125_00887Unannotated protein. (1372 aa)
GCA_000406125_00886Unannotated protein. (2125 aa)
GCA_000406125_00499Unannotated protein. (1036 aa)
GCA_000406125_00420Unannotated protein. (305 aa)
GCA_000406125_00412Unannotated protein. (321 aa)
GCA_000406125_00400Unannotated protein. (317 aa)
Your Current Organism:
Dickeya sp. NCPPB569
NCBI taxonomy Id: 568768
Other names: D. sp. NCPPB 569, Dickeya sp. NCPPB 569
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