STRINGSTRING
PV07_07489 PV07_07489 PV07_07868 PV07_07868 PV07_08269 PV07_08269 PV07_03403 PV07_03403 PV07_10663 PV07_10663 PV07_04183 PV07_04183 PV07_09420 PV07_09420
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV07_07489Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (471 aa)
PV07_07868Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family. (748 aa)
PV07_08269Uncharacterized protein. (340 aa)
PV07_03403Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family. (809 aa)
PV07_10663Isocitrate dehydrogenase [NAD] subunit, mitochondrial. (388 aa)
PV07_04183Citrate synthase; Belongs to the citrate synthase family. (468 aa)
PV07_09420Isocitrate dehydrogenase [NAD] subunit, mitochondrial. (387 aa)
Your Current Organism:
Cladophialophora immunda
NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008
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