(10 nodes) Mixed, incl. Carbon catabolite activation of transcription from RNA polymerase II promoter, and Protein of unknown function DUF3405 network (Cladophialophora immunda)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV07_12266	Uncharacterized protein. (303 aa)
	PV07_09934	Uncharacterized protein. (354 aa)
	PV07_09541	Uncharacterized protein. (535 aa)
	PV07_07950	Uncharacterized protein. (298 aa)
	PV07_03563	BHLH domain-containing protein. (548 aa)
	PV07_09358	Zn(2)-C6 fungal-type domain-containing protein. (689 aa)
	PV07_04764	Uncharacterized protein. (1481 aa)
	PV07_02595	Uncharacterized protein. (887 aa)
	PV07_00073	Uncharacterized protein. (839 aa)
	PV07_03608	Uncharacterized protein. (841 aa)

Your Current Organism:

Cladophialophora immunda

NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV07_00073	PV07_02595	A0A0D2CPN5	A0A0D2CID2	Uncharacterized protein.	Uncharacterized protein.	0.438
PV07_00073	PV07_03563	A0A0D2CPN5	A0A0D2B2W2	Uncharacterized protein.	BHLH domain-containing protein.	0.427
PV07_00073	PV07_09358	A0A0D2CPN5	A0A0D2C6V4	Uncharacterized protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.434
PV07_00073	PV07_09541	A0A0D2CPN5	A0A0D2AMX3	Uncharacterized protein.	Uncharacterized protein.	0.432
PV07_00073	PV07_09934	A0A0D2CPN5	A0A0D1Z969	Uncharacterized protein.	Uncharacterized protein.	0.509
PV07_02595	PV07_00073	A0A0D2CID2	A0A0D2CPN5	Uncharacterized protein.	Uncharacterized protein.	0.438
PV07_02595	PV07_03563	A0A0D2CID2	A0A0D2B2W2	Uncharacterized protein.	BHLH domain-containing protein.	0.432
PV07_02595	PV07_03608	A0A0D2CID2	A0A0D2D8M0	Uncharacterized protein.	Uncharacterized protein.	0.483
PV07_02595	PV07_07950	A0A0D2CID2	A0A0D2ASX6	Uncharacterized protein.	Uncharacterized protein.	0.446
PV07_02595	PV07_09541	A0A0D2CID2	A0A0D2AMX3	Uncharacterized protein.	Uncharacterized protein.	0.488
PV07_02595	PV07_12266	A0A0D2CID2	A0A0D1Z3Z6	Uncharacterized protein.	Uncharacterized protein.	0.478
PV07_03563	PV07_00073	A0A0D2B2W2	A0A0D2CPN5	BHLH domain-containing protein.	Uncharacterized protein.	0.427
PV07_03563	PV07_02595	A0A0D2B2W2	A0A0D2CID2	BHLH domain-containing protein.	Uncharacterized protein.	0.432
PV07_03563	PV07_04764	A0A0D2B2W2	A0A0D2CF96	BHLH domain-containing protein.	Uncharacterized protein.	0.485
PV07_03563	PV07_09934	A0A0D2B2W2	A0A0D1Z969	BHLH domain-containing protein.	Uncharacterized protein.	0.445
PV07_03608	PV07_02595	A0A0D2D8M0	A0A0D2CID2	Uncharacterized protein.	Uncharacterized protein.	0.483
PV07_03608	PV07_07950	A0A0D2D8M0	A0A0D2ASX6	Uncharacterized protein.	Uncharacterized protein.	0.463
PV07_03608	PV07_09541	A0A0D2D8M0	A0A0D2AMX3	Uncharacterized protein.	Uncharacterized protein.	0.500
PV07_04764	PV07_03563	A0A0D2CF96	A0A0D2B2W2	Uncharacterized protein.	BHLH domain-containing protein.	0.485
PV07_04764	PV07_09541	A0A0D2CF96	A0A0D2AMX3	Uncharacterized protein.	Uncharacterized protein.	0.408