(48 nodes) RAB geranylgeranylation, and Exocytosis network (Cladophialophora immunda)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV07_09911	Uncharacterized protein. (260 aa)
	PV07_10662	Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. (1034 aa)
	PV07_08285	Uncharacterized protein. (1574 aa)
	PV07_04719	Uncharacterized protein. (185 aa)
	PV07_04751	Uncharacterized protein. (210 aa)
	PV07_04074	Uncharacterized protein. (642 aa)
	PV07_04299	VPS9 domain-containing protein. (790 aa)
	PV07_02764	FYVE-type domain-containing protein. (265 aa)
	PV07_00948	Exo84_C domain-containing protein. (693 aa)
	PV07_01014	E3 ubiquitin-protein ligase PEP5. (980 aa)
	PV07_12317	Uncharacterized protein. (366 aa)
	PV07_12330	Exocyst complex protein EXO70; Involved in the secretory pathway as part of the exocyst complex which tethers secretory vesicles to the sites of exocytosis. Also plays a role in the assembly of the exocyst. Belongs to the EXO70 family. (631 aa)
	PV07_11021	Vps8 domain-containing protein. (1558 aa)
	PV07_11452	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (661 aa)
	PV07_10214	MBOAT_2 domain-containing protein. (517 aa)
	PV07_08491	Sec3-PIP2_bind domain-containing protein. (1519 aa)
	PV07_09494	Uncharacterized protein. (563 aa)
	PV07_06857	Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family. (512 aa)
	PV07_06894	Rab-GAP TBC domain-containing protein. (884 aa)
	PV07_06526	Uncharacterized protein. (374 aa)
	PV07_06903	Exocyst complex component SEC15; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. (817 aa)
	PV07_06952	Pep3_Vps18 domain-containing protein. (963 aa)
	PV07_04866	Uncharacterized protein. (875 aa)
	PV07_05659	Uncharacterized protein. (262 aa)
	PV07_12316	Rab-GAP TBC domain-containing protein. (875 aa)
	PV07_06351	F-box domain-containing protein. (942 aa)
	PV07_02856	CNH domain-containing protein. (1206 aa)
	PV07_06075	GTP-binding protein ypt5. (219 aa)
	PV07_09813	Rab-GAP TBC domain-containing protein. (895 aa)
	PV07_09828	Rab-GAP TBC domain-containing protein. (858 aa)
	PV07_10243	Uncharacterized protein. (609 aa)
	PV07_04441	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family. (468 aa)
	PV07_03531	Uncharacterized protein. (742 aa)
	PV07_08900	Uncharacterized protein. (721 aa)
	PV07_04073	GTP-binding protein ypt2. (211 aa)
	PV07_09493	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (339 aa)
	PV07_00798	Uncharacterized protein. (209 aa)
	PV07_06471	Sec8_exocyst domain-containing protein. (1271 aa)
	PV07_00366	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology. (830 aa)
	PV07_00548	Sec2p domain-containing protein. (303 aa)
	PV07_01868	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (593 aa)
	PV07_01522	Sec2p domain-containing protein. (709 aa)
	PV07_08258	Uncharacterized protein. (1307 aa)
	PV07_02365	CNH domain-containing protein. (1017 aa)
	PV07_05119	Uncharacterized protein. (769 aa)
	PV07_02857	Uncharacterized protein. (363 aa)
	PV07_03738	Uncharacterized protein. (1004 aa)
	PV07_00603	Uncharacterized protein. (205 aa)

Your Current Organism:

Cladophialophora immunda

NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV07_00366	PV07_00603	A0A0D2CUK6	A0A0D2DDJ0	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	Uncharacterized protein.	0.970
PV07_00366	PV07_01014	A0A0D2CUK6	A0A0D2B9D8	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	E3 ubiquitin-protein ligase PEP5.	0.996
PV07_00366	PV07_01868	A0A0D2CUK6	A0A0D2CVL9	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.832
PV07_00366	PV07_02365	A0A0D2CUK6	A0A0D2D0C8	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	CNH domain-containing protein.	0.997
PV07_00366	PV07_02856	A0A0D2CUK6	A0A0D2CJ68	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	CNH domain-containing protein.	0.994
PV07_00366	PV07_03738	A0A0D2CUK6	A0A0D2D8X1	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	Uncharacterized protein.	0.970
PV07_00366	PV07_04073	A0A0D2CUK6	A0A0D2CRI0	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	GTP-binding protein ypt2.	0.809
PV07_00366	PV07_04074	A0A0D2CUK6	A0A0D1ZWM7	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	Uncharacterized protein.	0.809
PV07_00366	PV07_04719	A0A0D2CUK6	A0A0D1ZLL5	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	Uncharacterized protein.	0.680
PV07_00366	PV07_05659	A0A0D2CUK6	A0A0D2CFI0	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	Uncharacterized protein.	0.404
PV07_00366	PV07_06075	A0A0D2CUK6	A0A0D2CJN1	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	GTP-binding protein ypt5.	0.775
PV07_00366	PV07_06952	A0A0D2CUK6	A0A0D2C9S4	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	Pep3_Vps18 domain-containing protein.	0.997
PV07_00366	PV07_08258	A0A0D2CUK6	A0A0D2CYF5	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	Uncharacterized protein.	0.996
PV07_00366	PV07_08900	A0A0D2CUK6	A0A0D2CQ57	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	Uncharacterized protein.	0.556
PV07_00366	PV07_09911	A0A0D2CUK6	A0A0D1Z950	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	Uncharacterized protein.	0.855
PV07_00366	PV07_10243	A0A0D2CUK6	A0A0D2CLX8	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	Uncharacterized protein.	0.566
PV07_00366	PV07_11021	A0A0D2CUK6	A0A0D2BWK6	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	Vps8 domain-containing protein.	0.943
PV07_00366	PV07_11452	A0A0D2CUK6	A0A0D2BY24	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.997
PV07_00548	PV07_00948	A0A0D2CV04	A0A0D2B960	Sec2p domain-containing protein.	Exo84_C domain-containing protein.	0.774
PV07_00548	PV07_02857	A0A0D2CV04	A0A0D2D661	Sec2p domain-containing protein.	Uncharacterized protein.	0.585