STRINGSTRING
PV07_00893 PV07_00893 PV07_00223 PV07_00223 PV07_04586 PV07_04586 PV07_04142 PV07_04142 PV07_03970 PV07_03970 PV07_03575 PV07_03575 PV07_02749 PV07_02749 PV07_06330 PV07_06330 PV07_06141 PV07_06141 PV07_05842 PV07_05842 PV07_05772 PV07_05772 PV07_04756 PV07_04756 PV07_04640 PV07_04640 PV07_08277 PV07_08277 PV07_08063 PV07_08063 PV07_07584 PV07_07584 PV07_07557 PV07_07557 PV07_07038 PV07_07038 NOP7 NOP7 PV07_09264 PV07_09264 PV07_09150 PV07_09150 YTM1 YTM1 PV07_08876 PV07_08876 PV07_08747 PV07_08747 PV07_08657 PV07_08657 PV07_10677 PV07_10677 PV07_10450 PV07_10450 PV07_10065 PV07_10065 PV07_09863 PV07_09863 PV07_11406 PV07_11406 PV07_10856 PV07_10856 PV07_12321 PV07_12321 PV07_02121 PV07_02121 PV07_01954 PV07_01954 PV07_01448 PV07_01448 PV07_01426 PV07_01426 PV07_01305 PV07_01305 PV07_00755 PV07_00755 PV07_00748 PV07_00748 PV07_00723 PV07_00723 PV07_00719 PV07_00719 PV07_00598 PV07_00598 LSM3 LSM3 PV07_00532 PV07_00532 PV07_00082 PV07_00082 PV07_04347 PV07_04347 PV07_03726 PV07_03726 PV07_03586 PV07_03586 PV07_03506 PV07_03506 PV07_03482 PV07_03482 PV07_03453 PV07_03453 PV07_02732 PV07_02732 PV07_02660 PV07_02660 PV07_06255 PV07_06255 PV07_05873 PV07_05873 PV07_05694 PV07_05694 PV07_05405 PV07_05405 PV07_05322 PV07_05322 PV07_04749 PV07_04749 PV07_01932 PV07_01932 PV07_01488 PV07_01488 PV07_08066 PV07_08066 PV07_01256 PV07_01256 PV07_02243 PV07_02243 PV07_01131 PV07_01131 PV07_07773 PV07_07773 PV07_01121 PV07_01121 PV07_02194 PV07_02194 PV07_01073 PV07_01073 PV07_02071 PV07_02071 PV07_02020 PV07_02020 PV07_01991 PV07_01991 PV07_07327 PV07_07327 PV07_01710 PV07_01710 PV07_01664 PV07_01664 PV07_00446 PV07_00446 PV07_00409 PV07_00409 PV07_07050 PV07_07050 PV07_06898 PV07_06898 PV07_01420 PV07_01420 PV07_01358 PV07_01358 PV07_00031 PV07_00031 PV07_04566 PV07_04566 PV07_06502 PV07_06502 PV07_00968 PV07_00968 PV07_04438 PV07_04438 PV07_00887 PV07_00887 PV07_04267 PV07_04267 PV07_09425 PV07_09425 PV07_00713 PV07_00713 PV07_09362 PV07_09362 PV07_09163 PV07_09163 PV07_00449 PV07_00449 PV07_00407 PV07_00407 PV07_03848 PV07_03848 PV07_03502 PV07_03502 PV07_03438 PV07_03438 PV07_03280 PV07_03280 PV07_10798 PV07_10798 PV07_03214 PV07_03214 PV07_04333 PV07_04333 PV07_04066 PV07_04066 PV07_03897 PV07_03897 PV07_10282 PV07_10282 PV07_03763 PV07_03763 PV07_10205 PV07_10205 PV07_03669 PV07_03669 PV07_03554 PV07_03554 PV07_10048 PV07_10048 PV07_02496 PV07_02496 PV07_02421 PV07_02421 PV07_06389 PV07_06389 PV07_06363 PV07_06363 PV07_11888 PV07_11888 PV07_11762 PV07_11762 PV07_05819 PV07_05819 PV07_02437 PV07_02437 PV07_11330 PV07_11330 PV07_06371 PV07_06371 TIF6 TIF6 PV07_05188 PV07_05188 PV07_05891 PV07_05891 PV07_05797 PV07_05797 PV07_12348 PV07_12348 PV07_05793 PV07_05793 LSM4 LSM4 PV07_05615 PV07_05615 PV07_12145 PV07_12145 PV07_05522 PV07_05522 PV07_04639 PV07_04639 PV07_08268 PV07_08268 PV07_05108 PV07_05108 PV07_07995 PV07_07995 PV07_07953 PV07_07953 PV07_07733 PV07_07733 PV07_04684 PV07_04684 PV07_07715 PV07_07715 PV07_04632 PV07_04632 PV07_08186 PV07_08186 PV07_07204 PV07_07204 PV07_07104 PV07_07104 PV07_07456 PV07_07456 PV07_07211 PV07_07211 PV07_06678 PV07_06678 PV07_06674 PV07_06674 PV07_07170 PV07_07170 PV07_06490 PV07_06490 PV07_07044 PV07_07044 PV07_07036 PV07_07036 PV07_09309 PV07_09309 PV07_09123 PV07_09123 PV07_06475 PV07_06475 PV07_09527 PV07_09527 PV07_09380 PV07_09380 PV07_09366 PV07_09366 PV07_08656 PV07_08656 PV07_09152 PV07_09152 PV07_10742 PV07_10742 PV07_08913 PV07_08913 PV07_10484 PV07_10484 PV07_10428 PV07_10428 PV07_10357 PV07_10357 PV07_11860 PV07_11860 NAT10 NAT10 ERB1 ERB1 PV07_09827 PV07_09827 PV07_09803 PV07_09803 PV07_09757 PV07_09757 PV07_11476 PV07_11476 PV07_11988 PV07_11988 PV07_11231 PV07_11231 PV07_12413 PV07_12413 PV07_12325 PV07_12325 PV07_11074 PV07_11074 PV07_12481 PV07_12481 PV07_10917 PV07_10917 PV07_12176 PV07_12176 PV07_12492 PV07_12492 PV07_12449 PV07_12449 PV07_02129 PV07_02129 PV07_02019 PV07_02019 PV07_01754 PV07_01754 PV07_01739 PV07_01739 PV07_00712 PV07_00712 PV07_00343 PV07_00343 PV07_00328 PV07_00328 PV07_00119 PV07_00119 SPB1 SPB1 PV07_04604 PV07_04604 PV07_04350 PV07_04350 PV07_03677 PV07_03677 PV07_03216 PV07_03216 PV07_03147 PV07_03147 PV07_02999 PV07_02999 PV07_02740 PV07_02740 PV07_02726 PV07_02726 PV07_02599 PV07_02599 PV07_02526 PV07_02526 PV07_05765 PV07_05765 PV07_05712 PV07_05712 PV07_05614 PV07_05614 PV07_05590 PV07_05590 PV07_08305 PV07_08305 PV07_08281 PV07_08281 PV07_08180 PV07_08180 PV07_08129 PV07_08129 PV07_08103 PV07_08103 PV07_08079 PV07_08079 PV07_07978 PV07_07978 PV07_07186 PV07_07186 PV07_07173 PV07_07173 PV07_07063 PV07_07063 PV07_06856 PV07_06856 PV07_06675 PV07_06675 PV07_06671 PV07_06671 PV07_09491 PV07_09491 PV07_09408 PV07_09408 PV07_09355 PV07_09355 PV07_09292 PV07_09292 PV07_08698 PV07_08698 PV07_08663 PV07_08663 PV07_08555 PV07_08555 PV07_08473 PV07_08473 PV07_08463 PV07_08463 PV07_10833 PV07_10833 PV07_09781 PV07_09781 PV07_09727 PV07_09727 PV07_11671 PV07_11671 PV07_11503 PV07_11503 PV07_11444 PV07_11444 PV07_11440 PV07_11440 FEN1 FEN1 PV07_12259 PV07_12259 PV07_12212 PV07_12212 PV07_02226 PV07_02226 PV07_01856 PV07_01856 PV07_01542 PV07_01542 PV07_01145 PV07_01145 PV07_00585 PV07_00585 PV07_00529 PV07_00529 PV07_00462 PV07_00462 PV07_00337 PV07_00337
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV07_00893Uncharacterized protein. (684 aa)
PV07_00223Uncharacterized protein. (328 aa)
PV07_04586KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (336 aa)
PV07_04142Uncharacterized protein. (399 aa)
PV07_03970WD_REPEATS_REGION domain-containing protein. (967 aa)
PV07_03575U1-type domain-containing protein. (300 aa)
PV07_02749AB hydrolase-1 domain-containing protein. (391 aa)
PV07_06330Uncharacterized protein. (195 aa)
PV07_06141Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (580 aa)
PV07_05842Uncharacterized protein. (2898 aa)
PV07_05772Uncharacterized protein. (274 aa)
PV07_04756Brix domain-containing protein. (337 aa)
PV07_04640Brix domain-containing protein. (296 aa)
PV07_08277Uncharacterized protein. (436 aa)
PV07_08063Uncharacterized protein. (386 aa)
PV07_07584CLP1_P domain-containing protein. (622 aa)
PV07_07557Uncharacterized protein. (692 aa)
PV07_07038Uncharacterized protein. (333 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (674 aa)
PV07_09264Uncharacterized protein. (937 aa)
PV07_09150Uncharacterized protein. (778 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (467 aa)
PV07_08876DRIM domain-containing protein. (2599 aa)
PV07_08747Uncharacterized protein. (141 aa)
PV07_08657Uncharacterized protein. (163 aa)
PV07_10677Uncharacterized protein. (580 aa)
PV07_10450Uncharacterized protein. (525 aa)
PV07_10065Uncharacterized protein. (1059 aa)
PV07_09863ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family. (477 aa)
PV07_11406RRM domain-containing protein. (528 aa)
PV07_10856Uncharacterized protein. (544 aa)
PV07_12321Utp12 domain-containing protein. (962 aa)
PV07_02121Uncharacterized protein. (491 aa)
PV07_01954Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4877 aa)
PV07_01448Uncharacterized protein. (683 aa)
PV07_01426Uncharacterized protein. (763 aa)
PV07_01305U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (287 aa)
PV07_00755CBF domain-containing protein. (1066 aa)
PV07_00748Uncharacterized protein. (703 aa)
PV07_00723Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (482 aa)
PV07_00719Uncharacterized protein. (254 aa)
PV07_00598Uncharacterized protein. (399 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
PV07_00532DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (123 aa)
PV07_00082ATP-dependent RNA helicase DBP10. (961 aa)
PV07_04347Uncharacterized protein. (397 aa)
PV07_03726Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (487 aa)
PV07_03586Uncharacterized protein. (302 aa)
PV07_03506Uncharacterized protein. (74 aa)
PV07_03482Kri1_C domain-containing protein. (609 aa)
PV07_03453PUM-HD domain-containing protein. (698 aa)
PV07_02732Uncharacterized protein. (822 aa)
PV07_02660Uncharacterized protein. (707 aa)
PV07_06255WD_REPEATS_REGION domain-containing protein. (1002 aa)
PV07_05873PINc domain-containing protein. (194 aa)
PV07_05694Uncharacterized protein. (291 aa)
PV07_05405NUC153 domain-containing protein. (725 aa)
PV07_05322CutC domain-containing protein. (224 aa)
PV07_04749F-box domain-containing protein. (343 aa)
PV07_01932DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (117 aa)
PV07_01488rRNA 2'-O-methyltransferase fibrillarin. (317 aa)
PV07_08066Uncharacterized protein. (799 aa)
PV07_01256Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
PV07_02243Uncharacterized protein. (281 aa)
PV07_01131Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (846 aa)
PV07_07773Uncharacterized protein. (536 aa)
PV07_01121RNA helicase. (877 aa)
PV07_02194Uncharacterized protein. (848 aa)
PV07_01073Uncharacterized protein. (348 aa)
PV07_02071Bms1-type G domain-containing protein. (1176 aa)
PV07_0202060S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (186 aa)
PV07_01991Transket_pyr domain-containing protein. (390 aa)
PV07_07327Uncharacterized protein. (1104 aa)
PV07_01710RPA43_OB domain-containing protein. (448 aa)
PV07_01664Uncharacterized protein. (1126 aa)
PV07_00446DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (143 aa)
PV07_00409DNA ligase. (1082 aa)
PV07_0705025S rRNA adenine-N(1) methyltransferase; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of an adenine present in helix 65 in 25S rRNA; Belongs to the BMT2 family. (476 aa)
PV07_06898Fcf2 domain-containing protein. (231 aa)
PV07_01420Transket_pyr domain-containing protein. (392 aa)
PV07_01358Sas10 domain-containing protein. (587 aa)
PV07_00031Uncharacterized protein. (655 aa)
PV07_0456618S rRNA biogenesis protein RCL1. (407 aa)
PV07_06502Brix domain-containing protein. (441 aa)
PV07_00968WD_REPEATS_REGION domain-containing protein. (511 aa)
PV07_04438Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family. (533 aa)
PV07_00887Uncharacterized protein. (318 aa)
PV07_04267Uncharacterized protein. (703 aa)
PV07_09425Pre-rRNA-processing protein PNO1. (267 aa)
PV07_00713RNase_PH domain-containing protein. (311 aa)
PV07_09362WD_REPEATS_REGION domain-containing protein. (603 aa)
PV07_09163RNase_PH domain-containing protein. (359 aa)
PV07_00449Ribonuclease P protein subunit. (262 aa)
PV07_00407Uncharacterized protein. (1797 aa)
PV07_03848Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (760 aa)
PV07_03502Uncharacterized protein. (188 aa)
PV07_03438RRM domain-containing protein. (667 aa)
PV07_03280TRASH domain-containing protein. (196 aa)
PV07_10798Uncharacterized protein. (263 aa)
PV07_03214Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (322 aa)
PV07_04333Csm1 domain-containing protein. (499 aa)
PV07_04066WD_REPEATS_REGION domain-containing protein. (1020 aa)
PV07_03897Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (661 aa)
PV07_10282Uncharacterized protein. (851 aa)
PV07_03763Uncharacterized protein. (398 aa)
PV07_10205Uncharacterized protein; Belongs to the DEAD box helicase family. (739 aa)
PV07_03669Uncharacterized protein. (757 aa)
PV07_03554U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (760 aa)
PV07_10048Uncharacterized protein. (1312 aa)
PV07_02496Hist_deacetyl domain-containing protein. (364 aa)
PV07_02421RNase_PH domain-containing protein. (258 aa)
PV07_06389Uncharacterized protein; Belongs to the RNR ribonuclease family. (1006 aa)
PV07_06363SWIB domain-containing protein. (275 aa)
PV07_11888Nop domain-containing protein. (653 aa)
PV07_11762Ribosomal RNA small subunit methyltransferase NEP1. (260 aa)
PV07_05819Ribosomal RNA small subunit methyltransferase B; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (703 aa)
PV07_02437Uncharacterized protein. (304 aa)
PV07_11330Brix domain-containing protein. (385 aa)
PV07_06371Uncharacterized protein. (222 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (248 aa)
PV07_05188Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (385 aa)
PV07_05891WD_REPEATS_REGION domain-containing protein. (528 aa)
PV07_05797Uncharacterized protein. (606 aa)
PV07_12348LisH domain-containing protein. (408 aa)
PV07_05793WD_REPEATS_REGION domain-containing protein. (601 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (141 aa)
PV07_05615H/ACA ribonucleoprotein complex subunit 3. (64 aa)
PV07_12145Uncharacterized protein. (161 aa)
PV07_05522WD_REPEATS_REGION domain-containing protein. (899 aa)
PV07_04639Uncharacterized protein. (375 aa)
PV07_08268Uncharacterized protein. (368 aa)
PV07_05108Methyltransf_25 domain-containing protein. (228 aa)
PV07_07995U3 small nucleolar RNA-associated protein 22. (1150 aa)
PV07_07953HMG box domain-containing protein. (294 aa)
PV07_07733RNA helicase. (626 aa)
PV07_04684Uncharacterized protein. (652 aa)
PV07_07715S1 motif domain-containing protein. (349 aa)
PV07_04632SWIM-type domain-containing protein. (314 aa)
PV07_08186H/ACA ribonucleoprotein complex subunit 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (401 aa)
PV07_07204RNase_PH domain-containing protein. (362 aa)
PV07_07104Uncharacterized protein. (480 aa)
PV07_07456WD_REPEATS_REGION domain-containing protein. (533 aa)
PV07_07211tRNA dimethylallyltransferase. (501 aa)
PV07_06678RNA_pol_L_2 domain-containing protein. (125 aa)
PV07_06674FCP1 homology domain-containing protein. (619 aa)
PV07_07170Poly [ADP-ribose] polymerase. (690 aa)
PV07_06490Uncharacterized protein. (306 aa)
PV07_07044U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (744 aa)
PV07_07036Uncharacterized protein. (159 aa)
PV07_09309U6 snRNA-associated Sm-like protein LSm6. (87 aa)
PV07_09123WD_REPEATS_REGION domain-containing protein. (559 aa)
PV07_06475Checkpoint protein; Belongs to the HUS1 family. (360 aa)
PV07_09527Uncharacterized protein. (512 aa)
PV07_09380G-patch domain-containing protein. (327 aa)
PV07_09366WD_REPEATS_REGION domain-containing protein. (998 aa)
PV07_08656Hist_deacetyl domain-containing protein. (324 aa)
PV07_09152Stc1 domain-containing protein. (261 aa)
PV07_10742RRM domain-containing protein. (309 aa)
PV07_08913Ribosome biogenesis protein NSA2. (261 aa)
PV07_10484DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1212 aa)
PV07_10428Uncharacterized protein. (246 aa)
PV07_10357Uncharacterized protein. (231 aa)
PV07_11860Brix domain-containing protein. (458 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1110 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (786 aa)
PV07_09827Uncharacterized protein. (390 aa)
PV07_09803WD_REPEATS_REGION domain-containing protein. (443 aa)
PV07_09757Uncharacterized protein. (238 aa)
PV07_11476Uncharacterized protein. (906 aa)
PV07_11988RNA helicase. (635 aa)
PV07_1123140S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
PV07_12413ATP-dependent RNA helicase fal1; Belongs to the DEAD box helicase family. (399 aa)
PV07_12325Bms1-type G domain-containing protein. (861 aa)
PV07_11074Zn(2)-C6 fungal-type domain-containing protein. (780 aa)
PV07_12481CBF domain-containing protein. (293 aa)
PV07_10917DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (910 aa)
PV07_12176Urb2 domain-containing protein. (1502 aa)
PV07_12492TYR_PHOSPHATASE_2 domain-containing protein. (656 aa)
PV07_12449rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (390 aa)
PV07_02129Uncharacterized protein; Belongs to the DEAD box helicase family. (523 aa)
PV07_02019Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (691 aa)
PV07_01754Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (387 aa)
PV07_01739SGL domain-containing protein. (416 aa)
PV07_00712Uncharacterized protein. (278 aa)
PV07_00343Uncharacterized protein. (490 aa)
PV07_00328Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (250 aa)
PV07_00119NUC153 domain-containing protein. (758 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (834 aa)
PV07_04604Nop domain-containing protein. (519 aa)
PV07_04350Uncharacterized protein. (736 aa)
PV07_03677Uncharacterized protein. (1069 aa)
PV07_03216Uncharacterized protein. (440 aa)
PV07_03147Uncharacterized protein. (982 aa)
PV07_02999KH_dom_type_1 domain-containing protein. (247 aa)
PV07_02740Uncharacterized protein. (1351 aa)
PV07_02726SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (531 aa)
PV07_02599Poly [ADP-ribose] polymerase. (684 aa)
PV07_02526BP28CT domain-containing protein. (1904 aa)
PV07_05765DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1180 aa)
PV07_05712Uncharacterized protein. (263 aa)
PV07_0561420S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (448 aa)
PV07_05590Protein kinase domain-containing protein. (1136 aa)
PV07_08305HRDC domain-containing protein. (847 aa)
PV07_08281Uncharacterized protein. (561 aa)
PV07_08180Uncharacterized protein. (394 aa)
PV07_08129J domain-containing protein. (446 aa)
PV07_08103MI domain-containing protein. (861 aa)
PV07_08079Uncharacterized protein. (283 aa)
PV07_07978Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. (1226 aa)
PV07_07186Uncharacterized protein. (1257 aa)
PV07_07173Centromere/microtubule-binding protein cbf5. (503 aa)
PV07_07063DUF2431 domain-containing protein. (381 aa)
PV07_06856Protein MAK16; Belongs to the MAK16 family. (325 aa)
PV07_06675Uncharacterized protein. (307 aa)
PV07_06671Uncharacterized protein. (204 aa)
PV07_09491Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (242 aa)
PV07_09408Uncharacterized protein. (274 aa)
PV07_09355Uncharacterized protein. (444 aa)
PV07_09292zf-LYAR domain-containing protein. (546 aa)
PV07_08698Uncharacterized protein. (856 aa)
PV07_08663Uncharacterized protein. (101 aa)
PV07_08555Ribosomal_L7Ae domain-containing protein. (301 aa)
PV07_08473Uncharacterized protein. (214 aa)
PV07_08463Uncharacterized protein. (548 aa)
PV07_10833Uncharacterized protein; Belongs to the DEAD box helicase family. (525 aa)
PV07_09781DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1746 aa)
PV07_09727RNase III domain-containing protein. (297 aa)
PV07_11671Uncharacterized protein. (360 aa)
PV07_11503Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (324 aa)
PV07_11444Uncharacterized protein. (378 aa)
PV07_11440RPOLD domain-containing protein. (373 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (405 aa)
PV07_12259Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family. (640 aa)
PV07_12212Uncharacterized protein. (383 aa)
PV07_02226Uncharacterized protein. (141 aa)
PV07_01856Uncharacterized protein. (329 aa)
PV07_01542CP-type G domain-containing protein. (554 aa)
PV07_01145Uncharacterized protein. (817 aa)
PV07_00585SRP9-21 domain-containing protein. (185 aa)
PV07_00529Uncharacterized protein. (1231 aa)
PV07_00462Uncharacterized protein; Belongs to the DEAD box helicase family. (846 aa)
PV07_00337Uncharacterized protein. (210 aa)
Your Current Organism:
Cladophialophora immunda
NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008
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