9 items (Cladophialophora immunda) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV07_07311	AAA domain-containing protein; Belongs to the AAA ATPase family. (463 aa)
	PV07_09556	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (1154 aa)
	PV07_04008	26S protease regulatory subunit 8; Belongs to the AAA ATPase family. (389 aa)
	PV07_00167	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (903 aa)
	PV07_06002	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family. (393 aa)
	PV07_11972	26S protease regulatory subunit 6A; Belongs to the AAA ATPase family. (465 aa)
	PV07_11743	VWFA domain-containing protein. (306 aa)
	PV07_07562	AAA domain-containing protein; Belongs to the AAA ATPase family. (422 aa)
	PV07_11090	26S protease regulatory subunit 7; Belongs to the AAA ATPase family. (439 aa)

Your Current Organism:

Cladophialophora immunda

NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV07_00167	PV07_04008	A0A0D2DC51	A0A0D2B4J7	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	26S protease regulatory subunit 8; Belongs to the AAA ATPase family.	0.999
PV07_00167	PV07_06002	A0A0D2DC51	A0A0D2D3E3	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.	0.998
PV07_00167	PV07_07311	A0A0D2DC51	A0A0D2AR84	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
PV07_00167	PV07_07562	A0A0D2DC51	A0A0D1ZIQ7	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.998
PV07_00167	PV07_09556	A0A0D2DC51	A0A0D2C5R0	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.999
PV07_00167	PV07_11090	A0A0D2DC51	A0A0D2AD80	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	26S protease regulatory subunit 7; Belongs to the AAA ATPase family.	0.999
PV07_00167	PV07_11743	A0A0D2DC51	A0A0D2CJ48	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	VWFA domain-containing protein.	0.999
PV07_00167	PV07_11972	A0A0D2DC51	A0A0D2CJP3	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	26S protease regulatory subunit 6A; Belongs to the AAA ATPase family.	0.999
PV07_04008	PV07_00167	A0A0D2B4J7	A0A0D2DC51	26S protease regulatory subunit 8; Belongs to the AAA ATPase family.	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.999
PV07_04008	PV07_06002	A0A0D2B4J7	A0A0D2D3E3	26S protease regulatory subunit 8; Belongs to the AAA ATPase family.	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.	0.999
PV07_04008	PV07_07311	A0A0D2B4J7	A0A0D2AR84	26S protease regulatory subunit 8; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
PV07_04008	PV07_07562	A0A0D2B4J7	A0A0D1ZIQ7	26S protease regulatory subunit 8; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
PV07_04008	PV07_09556	A0A0D2B4J7	A0A0D2C5R0	26S protease regulatory subunit 8; Belongs to the AAA ATPase family.	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.998
PV07_04008	PV07_11090	A0A0D2B4J7	A0A0D2AD80	26S protease regulatory subunit 8; Belongs to the AAA ATPase family.	26S protease regulatory subunit 7; Belongs to the AAA ATPase family.	0.999
PV07_04008	PV07_11743	A0A0D2B4J7	A0A0D2CJ48	26S protease regulatory subunit 8; Belongs to the AAA ATPase family.	VWFA domain-containing protein.	0.999
PV07_04008	PV07_11972	A0A0D2B4J7	A0A0D2CJP3	26S protease regulatory subunit 8; Belongs to the AAA ATPase family.	26S protease regulatory subunit 6A; Belongs to the AAA ATPase family.	0.999
PV07_06002	PV07_00167	A0A0D2D3E3	A0A0D2DC51	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.998
PV07_06002	PV07_04008	A0A0D2D3E3	A0A0D2B4J7	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.	26S protease regulatory subunit 8; Belongs to the AAA ATPase family.	0.999
PV07_06002	PV07_07311	A0A0D2D3E3	A0A0D2AR84	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
PV07_06002	PV07_07562	A0A0D2D3E3	A0A0D1ZIQ7	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999