(111 nodes) GTPase regulator activity network (Cladophialophora immunda)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV07_00959	DEP domain-containing protein. (1906 aa)
	PV07_12218	Arf-GAP domain-containing protein. (517 aa)
	PV07_11708	Uncharacterized protein. (1186 aa)
	PV07_10255	Uncharacterized protein. (147 aa)
	PV07_10440	Arf-GAP domain-containing protein. (588 aa)
	PV07_08489	Uncharacterized protein. (1218 aa)
	PV07_08550	Rho-GAP domain-containing protein. (841 aa)
	PV07_08949	Uncharacterized protein. (1119 aa)
	PV07_09422	Uncharacterized protein. (1340 aa)
	PV07_06499	Uncharacterized protein. (1227 aa)
	PV07_07095	Rab-GAP TBC domain-containing protein. (1145 aa)
	PV07_07137	Uncharacterized protein. (647 aa)
	PV07_07901	Ras-GAP domain-containing protein. (810 aa)
	PV07_08225	Uncharacterized protein. (275 aa)
	PV07_05265	AB hydrolase-1 domain-containing protein. (386 aa)
	PV07_05791	Guanine nucleotide-binding protein subunit beta-like protein. (316 aa)
	PV07_05956	Uncharacterized protein. (784 aa)
	PV07_06395	Uncharacterized protein. (1156 aa)
	PV07_02525	Uncharacterized protein. (1011 aa)
	PV07_02768	Uncharacterized protein. (174 aa)
	PV07_02988	Uncharacterized protein. (1754 aa)
	PV07_03096	Uncharacterized protein; Belongs to the EF-1-beta/EF-1-delta family. (230 aa)
	PV07_03465	Uncharacterized protein. (269 aa)
	PV07_04299	VPS9 domain-containing protein. (790 aa)
	PV07_00071	Uncharacterized protein. (1235 aa)
	PV07_00405	DH domain-containing protein. (665 aa)
	PV07_01106	SEC7 domain-containing protein. (1687 aa)
	PV07_12400	Uncharacterized protein. (118 aa)
	PV07_11132	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (165 aa)
	PV07_10047	Rab-GAP TBC domain-containing protein. (416 aa)
	PV07_10585	AB hydrolase-1 domain-containing protein. (372 aa)
	PV07_08974	Uncharacterized protein. (762 aa)
	PV07_09224	Uncharacterized protein. (1395 aa)
	PV07_09248	SEC7 domain-containing protein. (2032 aa)
	PV07_07096	Uncharacterized protein. (1771 aa)
	PV07_07159	AB hydrolase-1 domain-containing protein. (397 aa)
	PV07_07395	Arf-GAP domain-containing protein. (389 aa)
	PV07_07585	UDENN FLCN/SMCR8-type domain-containing protein. (565 aa)
	PV07_07655	W2 domain-containing protein. (682 aa)
	PV07_02446	Uncharacterized protein. (1643 aa)
	PV07_00289	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic. (268 aa)
	PV07_00962	Rab-GAP TBC domain-containing protein. (1038 aa)
	PV07_01303	Uncharacterized protein. (947 aa)
	PV07_01490	Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (122 aa)
	PV07_12255	Rab-GAP TBC domain-containing protein. (448 aa)
	PV07_10871	Uncharacterized protein. (420 aa)
	PV07_10949	Uncharacterized protein. (969 aa)
	PV07_11742	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (261 aa)
	PV07_11221	Uncharacterized protein. (190 aa)
	PV07_10302	F-box domain-containing protein. (603 aa)
	PV07_09735	Uncharacterized protein. (1685 aa)
	PV07_10817	Rab-GAP TBC domain-containing protein. (685 aa)
	PV07_10491	Uncharacterized protein. (680 aa)
	PV07_08386	Rab-GAP TBC domain-containing protein. (607 aa)
	PV07_08589	Uncharacterized protein. (193 aa)
	PV07_09492	Rho-GAP domain-containing protein. (679 aa)
	PV07_06857	Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family. (512 aa)
	PV07_09534	Uncharacterized protein. (452 aa)
	PV07_06894	Rab-GAP TBC domain-containing protein. (884 aa)
	PV07_07017	Uncharacterized protein. (490 aa)
	PV07_07614	C-CAP/cofactor C-like domain-containing protein. (415 aa)
	PV07_07185	Uncharacterized protein. (1357 aa)
	PV07_07569	Ras-GAP domain-containing protein. (1238 aa)
	PV07_08229	Lgl_C domain-containing protein. (1009 aa)
	PV07_08284	SEC7 domain-containing protein. (1428 aa)
	PV07_05464	Uncharacterized protein. (1096 aa)
	PV07_12316	Rab-GAP TBC domain-containing protein. (875 aa)
	PV07_06053	Uncharacterized protein. (392 aa)
	PV07_06356	Rab-GAP TBC domain-containing protein. (912 aa)
	PV07_11335	Uncharacterized protein. (630 aa)
	PV07_11394	Uncharacterized protein. (793 aa)
	PV07_06168	C2 domain-containing protein. (646 aa)
	PV07_09763	Uncharacterized protein. (957 aa)
	PV07_09813	Rab-GAP TBC domain-containing protein. (895 aa)
	PV07_09828	Rab-GAP TBC domain-containing protein. (858 aa)
	PV07_06358	DH domain-containing protein. (1943 aa)
	PV07_02945	Uncharacterized protein. (745 aa)
	PV07_04093	Uncharacterized protein. (1301 aa)
	PV07_04269	Uncharacterized protein. (671 aa)
	PV07_10722	HET domain-containing protein. (739 aa)
	PV07_08402	W2 domain-containing protein. (425 aa)
	PV07_04441	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family. (468 aa)
	PV07_08501	Uncharacterized protein; Belongs to the DOCK family. (1456 aa)
	PV07_03531	Uncharacterized protein. (742 aa)
	PV07_00068	Uncharacterized protein. (195 aa)
	PV07_03570	Uncharacterized protein. (178 aa)
	PV07_03644	Uncharacterized protein. (566 aa)
	PV07_03662	RIC1 domain-containing protein. (1065 aa)
	PV07_00815	Uncharacterized protein. (819 aa)
	PV07_06895	Rap-GAP domain-containing protein. (1425 aa)
	PV07_00548	Sec2p domain-containing protein. (303 aa)
	PV07_00614	RanBD1 domain-containing protein. (270 aa)
	PV07_00622	Uncharacterized protein. (773 aa)
	PV07_01786	Uncharacterized protein. (885 aa)
	PV07_00965	UDENN domain-containing protein. (948 aa)
	PV07_01522	Sec2p domain-containing protein. (709 aa)
	PV07_04633	Uncharacterized protein. (1412 aa)
	PV07_01913	Trafficking protein particle complex subunit BET3. (192 aa)
	PV07_02365	CNH domain-containing protein. (1017 aa)
	PV07_05258	Uncharacterized protein. (1030 aa)
	PV07_05933	Uncharacterized protein. (798 aa)
	PV07_06320	Uncharacterized protein. (968 aa)
	PV07_02476	Uncharacterized protein. (376 aa)
	PV07_03666	Uncharacterized protein. (1262 aa)
	PV07_03873	Apple domain-containing protein. (589 aa)
	PV07_00064	TFCD_C domain-containing protein. (1198 aa)
	PV07_00426	Uncharacterized protein. (491 aa)
	PV07_00811	RHOMBOID-like protein. (541 aa)
	PV07_01814	Uncharacterized protein. (374 aa)
	PV07_01859	LIM zinc-binding domain-containing protein. (578 aa)
	PV07_02310	Uncharacterized protein. (158 aa)

Your Current Organism:

Cladophialophora immunda

NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV07_00064	PV07_07614	A0A0D2DBU5	A0A0D2CA30	TFCD_C domain-containing protein.	C-CAP/cofactor C-like domain-containing protein.	0.640
PV07_00068	PV07_01303	A0A0D2CPN2	A0A0D2BAG6	Uncharacterized protein.	Uncharacterized protein.	0.500
PV07_00068	PV07_01859	A0A0D2CPN2	A0A0D2DHB1	Uncharacterized protein.	LIM zinc-binding domain-containing protein.	0.513
PV07_00068	PV07_04441	A0A0D2CPN2	A0A0D2CNY4	Uncharacterized protein.	Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.	0.568
PV07_00068	PV07_06857	A0A0D2CPN2	A0A0D2C7H6	Uncharacterized protein.	Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family.	0.471
PV07_00068	PV07_08489	A0A0D2CPN2	A0A0D1ZC17	Uncharacterized protein.	Uncharacterized protein.	0.513
PV07_00068	PV07_11708	A0A0D2CPN2	A0A0D1Z7G9	Uncharacterized protein.	Uncharacterized protein.	0.426
PV07_00071	PV07_01303	A0A0D1ZYK3	A0A0D2BAG6	Uncharacterized protein.	Uncharacterized protein.	0.523
PV07_00071	PV07_02310	A0A0D1ZYK3	A0A0D2DIW3	Uncharacterized protein.	Uncharacterized protein.	0.579
PV07_00071	PV07_03465	A0A0D1ZYK3	A0A0D1ZUR6	Uncharacterized protein.	Uncharacterized protein.	0.422
PV07_00071	PV07_06358	A0A0D1ZYK3	A0A0D2CKP5	Uncharacterized protein.	DH domain-containing protein.	0.422
PV07_00071	PV07_07569	A0A0D1ZYK3	A0A0D2CBU2	Uncharacterized protein.	Ras-GAP domain-containing protein.	0.448
PV07_00071	PV07_09763	A0A0D1ZYK3	A0A0D2CKI6	Uncharacterized protein.	Uncharacterized protein.	0.422
PV07_00289	PV07_01913	A0A0D2B763	A0A0D2CZ25	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.	Trafficking protein particle complex subunit BET3.	0.999
PV07_00289	PV07_04633	A0A0D2B763	A0A0D2CYV3	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.	Uncharacterized protein.	0.999
PV07_00289	PV07_06356	A0A0D2B763	A0A0D2CHM8	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.	Rab-GAP TBC domain-containing protein.	0.533
PV07_00289	PV07_06857	A0A0D2B763	A0A0D2C7H6	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.	Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family.	0.655
PV07_00289	PV07_07185	A0A0D2B763	A0A0D2CAG6	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.	Uncharacterized protein.	0.999
PV07_00289	PV07_10722	A0A0D2B763	A0A0D2CNF2	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.	HET domain-containing protein.	0.977
PV07_00289	PV07_11132	A0A0D2B763	A0A0D2ADC2	Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.999