29 items (Cladophialophora immunda) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV07_07545	Uncharacterized protein. (1555 aa)
	PV07_03078	SANT_DAMP1_like domain-containing protein. (827 aa)
	PV07_02944	Uncharacterized protein. (1542 aa)
	PV07_11509	AAA domain-containing protein. (1698 aa)
	PV07_11087	H15 domain-containing protein. (286 aa)
	PV07_05766	Peptidylprolyl isomerase. (528 aa)
	PV07_05654	Uncharacterized protein. (607 aa)
	PV07_08035	Histone H2B; Belongs to the histone H2B family. (141 aa)
	PV07_08253	Uncharacterized protein; Belongs to the actin family. (485 aa)
	PV07_06809	WD_REPEATS_REGION domain-containing protein. (625 aa)
	PV07_09227	FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (569 aa)
	PV07_10093	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
	PV07_10286	WD_REPEATS_REGION domain-containing protein. (1217 aa)
	PV07_05697	YL1_C domain-containing protein. (660 aa)
	PV07_05141	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family. (333 aa)
	PV07_07115	Uncharacterized protein. (1681 aa)
	PV07_04166	Uncharacterized protein. (1445 aa)
	PV07_08643	Uncharacterized protein. (99 aa)
	PV07_09171	PAPA-1 domain-containing protein. (493 aa)
	PV07_02329	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (457 aa)
	PV07_10265	Uncharacterized protein. (350 aa)
	PV07_08394	SHNi-TPR domain-containing protein. (500 aa)
	PV07_06546	Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly. (293 aa)
	PV07_06086	WD_REPEATS_REGION domain-containing protein. (727 aa)
	PV07_06581	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family. (396 aa)
	PV07_02478	Uncharacterized protein. (876 aa)
	PV07_02087	Uncharacterized protein. (245 aa)
	PV07_02245	Uncharacterized protein. (1629 aa)
	PV07_08173	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1422 aa)

Your Current Organism:

Cladophialophora immunda

NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV07_02087	PV07_02245	A0A0D2DI20	A0A0D2D031	Uncharacterized protein.	Uncharacterized protein.	0.976
PV07_02087	PV07_02329	A0A0D2DI20	A0A0D2DIX7	Uncharacterized protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.982
PV07_02087	PV07_03078	A0A0D2DI20	A0A0D2CJU4	Uncharacterized protein.	SANT_DAMP1_like domain-containing protein.	0.987
PV07_02087	PV07_05697	A0A0D2DI20	A0A0D2AX92	Uncharacterized protein.	YL1_C domain-containing protein.	0.982
PV07_02087	PV07_06546	A0A0D2DI20	A0A0D1ZFW2	Uncharacterized protein.	Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly.	0.440
PV07_02087	PV07_07115	A0A0D2DI20	A0A0D2AQJ9	Uncharacterized protein.	Uncharacterized protein.	0.599
PV07_02087	PV07_08035	A0A0D2DI20	A0A0D2CDL3	Uncharacterized protein.	Histone H2B; Belongs to the histone H2B family.	0.551
PV07_02087	PV07_08253	A0A0D2DI20	A0A0D2CBZ9	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.822
PV07_02087	PV07_10265	A0A0D2DI20	A0A0D1ZA41	Uncharacterized protein.	Uncharacterized protein.	0.960
PV07_02245	PV07_02087	A0A0D2D031	A0A0D2DI20	Uncharacterized protein.	Uncharacterized protein.	0.976
PV07_02245	PV07_02329	A0A0D2D031	A0A0D2DIX7	Uncharacterized protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.993
PV07_02245	PV07_03078	A0A0D2D031	A0A0D2CJU4	Uncharacterized protein.	SANT_DAMP1_like domain-containing protein.	0.983
PV07_02245	PV07_04166	A0A0D2D031	A0A0D1ZWV3	Uncharacterized protein.	Uncharacterized protein.	0.419
PV07_02245	PV07_05697	A0A0D2D031	A0A0D2AX92	Uncharacterized protein.	YL1_C domain-containing protein.	0.980
PV07_02245	PV07_06546	A0A0D2D031	A0A0D1ZFW2	Uncharacterized protein.	Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly.	0.432
PV07_02245	PV07_06809	A0A0D2D031	A0A0D2C7E8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.419
PV07_02245	PV07_08035	A0A0D2D031	A0A0D2CDL3	Uncharacterized protein.	Histone H2B; Belongs to the histone H2B family.	0.924
PV07_02245	PV07_08253	A0A0D2D031	A0A0D2CBZ9	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.976
PV07_02245	PV07_10093	A0A0D2D031	A0A0D2C1N1	Uncharacterized protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.551
PV07_02245	PV07_10265	A0A0D2D031	A0A0D1ZA41	Uncharacterized protein.	Uncharacterized protein.	0.970