STRINGSTRING
PV07_06593 PV07_06593 PV07_08541 PV07_08541 PV07_08349 PV07_08349 PV07_02715 PV07_02715 PV07_04607 PV07_04607 PV07_00777 PV07_00777 PV07_02966 PV07_02966 PV07_06707 PV07_06707 PV07_00081 PV07_00081 PV07_08539 PV07_08539 PV07_08035 PV07_08035 PV07_07997 PV07_07997 PV07_06475 PV07_06475 PV07_03756 PV07_03756 PV07_03166 PV07_03166 PV07_05765 PV07_05765
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV07_06593WD_REPEATS_REGION domain-containing protein. (570 aa)
PV07_08541Vezatin domain-containing protein. (591 aa)
PV07_08349Helicase ATP-binding domain-containing protein. (855 aa)
PV07_02715Protein kinase domain-containing protein. (538 aa)
PV07_04607AAA domain-containing protein. (468 aa)
PV07_00777Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (767 aa)
PV07_02966DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (624 aa)
PV07_06707UmuC domain-containing protein. (655 aa)
PV07_00081Uncharacterized protein. (279 aa)
PV07_08539Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (259 aa)
PV07_08035Histone H2B; Belongs to the histone H2B family. (141 aa)
PV07_07997SMC_N domain-containing protein. (1141 aa)
PV07_06475Checkpoint protein; Belongs to the HUS1 family. (360 aa)
PV07_03756XPG_I_2 domain-containing protein. (653 aa)
PV07_03166UPF0029 domain-containing protein. (395 aa)
PV07_05765DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1180 aa)
Your Current Organism:
Cladophialophora immunda
NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008
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