(26 nodes) Retrograde transport, endosome to Golgi network (Cladophialophora immunda)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV07_07393	Vacuolar protein sorting-associated protein 17; Plays a role in vesicular protein sorting. Belongs to the VPS17 family. (615 aa)
	PV07_04839	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (869 aa)
	PV07_02429	ENTH domain-containing protein. (548 aa)
	PV07_09881	UBIQUITIN_CONJUGAT_2 domain-containing protein. (1089 aa)
	PV07_03585	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family. (200 aa)
	PV07_02987	Uncharacterized protein. (322 aa)
	PV07_09212	Uncharacterized protein. (674 aa)
	PV07_03662	RIC1 domain-containing protein. (1065 aa)
	PV07_04908	Uncharacterized protein. (301 aa)
	PV07_04633	Uncharacterized protein. (1412 aa)
	PV07_02323	t-SNARE coiled-coil homology domain-containing protein. (229 aa)
	PV07_00798	Uncharacterized protein. (209 aa)
	PV07_06029	Vps54 domain-containing protein. (1098 aa)
	PV07_11126	Vps53_N domain-containing protein. (868 aa)
	PV07_06749	Uncharacterized protein. (2030 aa)
	PV07_04162	DAO domain-containing protein. (460 aa)
	PV07_00590	Uncharacterized protein. (565 aa)
	PV07_00762	PX domain-containing protein. (707 aa)
	PV07_08974	Uncharacterized protein. (762 aa)
	PV07_07855	Uncharacterized protein. (334 aa)
	PV07_03891	Uncharacterized protein. (139 aa)
	PV07_02080	PX domain-containing protein. (626 aa)
	PV07_02376	Thioredoxin reductase. (358 aa)
	PV07_11101	PX domain-containing protein. (580 aa)
	PV07_06476	GAR domain-containing protein. (1068 aa)
	PV07_07216	DAO domain-containing protein. (442 aa)

Your Current Organism:

Cladophialophora immunda

NCBI taxonomy Id: 569365
Other names: C. immunda, CBS 834.96, Cladophialophora sp. CBS 834.96, Cladophialophora sp. HB-2008

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV07_00762	PV07_02080	A0A0D2A0L0	A0A0D2BCZ1	PX domain-containing protein.	PX domain-containing protein.	0.445
PV07_00762	PV07_02987	A0A0D2A0L0	A0A0D2CMP4	PX domain-containing protein.	Uncharacterized protein.	0.723
PV07_00762	PV07_03585	A0A0D2A0L0	A0A0D2CLH8	PX domain-containing protein.	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.	0.702
PV07_00762	PV07_04839	A0A0D2A0L0	A0A0D2CD36	PX domain-containing protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.761
PV07_00762	PV07_07393	A0A0D2A0L0	A0A0D2CB70	PX domain-containing protein.	Vacuolar protein sorting-associated protein 17; Plays a role in vesicular protein sorting. Belongs to the VPS17 family.	0.555
PV07_00762	PV07_11101	A0A0D2A0L0	A0A0D2BUW0	PX domain-containing protein.	PX domain-containing protein.	0.509
PV07_00798	PV07_02323	A0A0D2CS47	A0A0D2CX33	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.821
PV07_00798	PV07_02376	A0A0D2CS47	A0A0D2BDW2	Uncharacterized protein.	Thioredoxin reductase.	0.879
PV07_00798	PV07_02987	A0A0D2CS47	A0A0D2CMP4	Uncharacterized protein.	Uncharacterized protein.	0.611
PV07_00798	PV07_03585	A0A0D2CS47	A0A0D2CLH8	Uncharacterized protein.	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.	0.524
PV07_00798	PV07_03662	A0A0D2CS47	A0A0D2CQ67	Uncharacterized protein.	RIC1 domain-containing protein.	0.965
PV07_00798	PV07_04839	A0A0D2CS47	A0A0D2CD36	Uncharacterized protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.719
PV07_00798	PV07_06029	A0A0D2CS47	A0A0D2D3G7	Uncharacterized protein.	Vps54 domain-containing protein.	0.859
PV07_00798	PV07_07855	A0A0D2CS47	A0A0D2ASP1	Uncharacterized protein.	Uncharacterized protein.	0.738
PV07_00798	PV07_08974	A0A0D2CS47	A0A0D2ALC2	Uncharacterized protein.	Uncharacterized protein.	0.863
PV07_00798	PV07_09212	A0A0D2CS47	A0A0D2CR62	Uncharacterized protein.	Uncharacterized protein.	0.935
PV07_00798	PV07_11101	A0A0D2CS47	A0A0D2BUW0	Uncharacterized protein.	PX domain-containing protein.	0.439
PV07_00798	PV07_11126	A0A0D2CS47	A0A0D1Z5J8	Uncharacterized protein.	Vps53_N domain-containing protein.	0.879
PV07_02080	PV07_00762	A0A0D2BCZ1	A0A0D2A0L0	PX domain-containing protein.	PX domain-containing protein.	0.445
PV07_02080	PV07_02987	A0A0D2BCZ1	A0A0D2CMP4	PX domain-containing protein.	Uncharacterized protein.	0.764